Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTP4A1Q93096 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTP4A1Q93096 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTP4A1Q93096 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTP4A1Q93096 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTP4A1Q93096 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.85■□□□□ 0.93
PTP4A1Q93096 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTP4A1Q93096 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.84■□□□□ 0.93
PTP4A1Q93096 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.84■□□□□ 0.93
PTP4A1Q93096 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTP4A1Q93096 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTP4A1Q93096 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTP4A1Q93096 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.83■□□□□ 0.93
PTP4A1Q93096 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.83■□□□□ 0.92
PTP4A1Q93096 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTP4A1Q93096 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PTP4A1Q93096 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTP4A1Q93096 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTP4A1Q93096 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.82■□□□□ 0.92
PTP4A1Q93096 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PTP4A1Q93096 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.82■□□□□ 0.92
PTP4A1Q93096 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTP4A1Q93096 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTP4A1Q93096 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTP4A1Q93096 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTP4A1Q93096 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTP4A1Q93096 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.81■□□□□ 0.92
PTP4A1Q93096 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.81■□□□□ 0.92
PTP4A1Q93096 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTP4A1Q93096 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTP4A1Q93096 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTP4A1Q93096 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.8■□□□□ 0.92
PTP4A1Q93096 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PTP4A1Q93096 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.8■□□□□ 0.92
PTP4A1Q93096 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTP4A1Q93096 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PTP4A1Q93096 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.8■□□□□ 0.92
PTP4A1Q93096 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.79■□□□□ 0.92
PTP4A1Q93096 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A1Q93096 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A1Q93096 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A1Q93096 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A1Q93096 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A1Q93096 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A1Q93096 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A1Q93096 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PTP4A1Q93096 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PTP4A1Q93096 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PTP4A1Q93096 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A1Q93096 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.78■□□□□ 0.92
PTP4A1Q93096 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PTP4A1Q93096 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A1Q93096 AC133552.2-201ENST00000619106 1032 ntBASIC20.78■□□□□ 0.92
PTP4A1Q93096 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A1Q93096 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A1Q93096 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A1Q93096 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A1Q93096 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.78■□□□□ 0.92
PTP4A1Q93096 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTP4A1Q93096 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.77■□□□□ 0.92
PTP4A1Q93096 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTP4A1Q93096 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PTP4A1Q93096 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.77■□□□□ 0.92
PTP4A1Q93096 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTP4A1Q93096 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTP4A1Q93096 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTP4A1Q93096 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PTP4A1Q93096 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
PTP4A1Q93096 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PTP4A1Q93096 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTP4A1Q93096 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTP4A1Q93096 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.76■□□□□ 0.91
PTP4A1Q93096 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.76■□□□□ 0.91
PTP4A1Q93096 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTP4A1Q93096 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTP4A1Q93096 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.76■□□□□ 0.91
PTP4A1Q93096 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.75■□□□□ 0.91
PTP4A1Q93096 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A1Q93096 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A1Q93096 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A1Q93096 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A1Q93096 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A1Q93096 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTP4A1Q93096 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTP4A1Q93096 AC009831.1-201ENST00000580420 1582 ntBASIC20.75■□□□□ 0.91
PTP4A1Q93096 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A1Q93096 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A1Q93096 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.74■□□□□ 0.91
PTP4A1Q93096 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PTP4A1Q93096 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTP4A1Q93096 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.74■□□□□ 0.91
PTP4A1Q93096 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PTP4A1Q93096 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTP4A1Q93096 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
PTP4A1Q93096 C9orf163-202ENST00000624034 2573 ntBASIC20.74■□□□□ 0.91
PTP4A1Q93096 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.74■□□□□ 0.91
PTP4A1Q93096 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A1Q93096 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.73■□□□□ 0.91
PTP4A1Q93096 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTP4A1Q93096 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms