Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RPGRQ92834 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.94■■■□□ 2.22
RPGRQ92834 AL355001.2-201ENST00000620617 1191 ntBASIC28.94■■■□□ 2.22
RPGRQ92834 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RPGRQ92834 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.94■■■□□ 2.22
RPGRQ92834 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
RPGRQ92834 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RPGRQ92834 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RPGRQ92834 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
RPGRQ92834 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
RPGRQ92834 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RPGRQ92834 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.93■■■□□ 2.22
RPGRQ92834 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RPGRQ92834 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.92■■■□□ 2.22
RPGRQ92834 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RPGRQ92834 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RPGRQ92834 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RPGRQ92834 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
RPGRQ92834 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RPGRQ92834 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RPGRQ92834 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.92■■■□□ 2.22
RPGRQ92834 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
RPGRQ92834 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RPGRQ92834 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
RPGRQ92834 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
RPGRQ92834 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
RPGRQ92834 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RPGRQ92834 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.9■■■□□ 2.22
RPGRQ92834 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
RPGRQ92834 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
RPGRQ92834 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.9■■■□□ 2.22
RPGRQ92834 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.9■■■□□ 2.22
RPGRQ92834 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.89■■■□□ 2.22
RPGRQ92834 AC092666.2-201ENST00000613287 246 ntBASIC28.89■■■□□ 2.22
RPGRQ92834 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RPGRQ92834 AC005703.6-201ENST00000623265 1329 ntBASIC28.89■■■□□ 2.21
RPGRQ92834 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
RPGRQ92834 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RPGRQ92834 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RPGRQ92834 AC026271.2-201ENST00000428091 497 ntBASIC28.88■■■□□ 2.21
RPGRQ92834 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RPGRQ92834 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
RPGRQ92834 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.88■■■□□ 2.21
RPGRQ92834 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
RPGRQ92834 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RPGRQ92834 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RPGRQ92834 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RPGRQ92834 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.87■■■□□ 2.21
RPGRQ92834 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.87■■■□□ 2.21
RPGRQ92834 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
RPGRQ92834 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RPGRQ92834 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RPGRQ92834 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RPGRQ92834 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.85■■■□□ 2.21
RPGRQ92834 AC010501.1-201ENST00000606270 1962 ntBASIC28.85■■■□□ 2.21
RPGRQ92834 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.85■■■□□ 2.21
RPGRQ92834 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RPGRQ92834 DUX4L19-201ENST00000557448 1267 ntBASIC28.85■■■□□ 2.21
RPGRQ92834 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.85■■■□□ 2.21
RPGRQ92834 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RPGRQ92834 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
RPGRQ92834 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
RPGRQ92834 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RPGRQ92834 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RPGRQ92834 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.84■■■□□ 2.21
RPGRQ92834 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RPGRQ92834 AC105265.2-201ENST00000467189 838 ntBASIC28.84■■■□□ 2.21
RPGRQ92834 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.84■■■□□ 2.21
RPGRQ92834 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RPGRQ92834 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.84■■■□□ 2.21
RPGRQ92834 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.83■■■□□ 2.21
RPGRQ92834 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.83■■■□□ 2.21
RPGRQ92834 AF213884.3-201ENST00000563833 479 ntBASIC28.83■■■□□ 2.21
RPGRQ92834 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RPGRQ92834 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
RPGRQ92834 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
RPGRQ92834 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC28.82■■■□□ 2.2
RPGRQ92834 AL136967.2-201ENST00000623968 743 ntBASIC28.82■■■□□ 2.2
RPGRQ92834 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
RPGRQ92834 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RPGRQ92834 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
RPGRQ92834 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
RPGRQ92834 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.82■■■□□ 2.2
RPGRQ92834 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
RPGRQ92834 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.81■■■□□ 2.2
RPGRQ92834 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RPGRQ92834 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.81■■■□□ 2.2
RPGRQ92834 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RPGRQ92834 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.8■■■□□ 2.2
RPGRQ92834 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.8■■■□□ 2.2
RPGRQ92834 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RPGRQ92834 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
RPGRQ92834 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.8■■■□□ 2.2
RPGRQ92834 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
RPGRQ92834 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
RPGRQ92834 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
RPGRQ92834 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
RPGRQ92834 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.79■■■□□ 2.2
RPGRQ92834 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.79■■■□□ 2.2
RPGRQ92834 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.79■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms