Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01560Q8TB33 UNC93B3-201ENST00000308076 687 ntBASIC20.24■□□□□ 0.83
LINC01560Q8TB33 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01560Q8TB33 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC01560Q8TB33 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01560Q8TB33 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC01560Q8TB33 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.23■□□□□ 0.83
LINC01560Q8TB33 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
LINC01560Q8TB33 AC106739.1-201ENST00000617035 715 ntBASIC20.23■□□□□ 0.83
LINC01560Q8TB33 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.23■□□□□ 0.83
LINC01560Q8TB33 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LINC01560Q8TB33 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01560Q8TB33 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LINC01560Q8TB33 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LINC01560Q8TB33 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LINC01560Q8TB33 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LINC01560Q8TB33 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC01560Q8TB33 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC01560Q8TB33 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC01560Q8TB33 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LINC01560Q8TB33 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01560Q8TB33 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC01560Q8TB33 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LINC01560Q8TB33 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC01560Q8TB33 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC01560Q8TB33 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.2■□□□□ 0.82
LINC01560Q8TB33 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.2■□□□□ 0.82
LINC01560Q8TB33 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LINC01560Q8TB33 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.2■□□□□ 0.82
LINC01560Q8TB33 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC01560Q8TB33 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LINC01560Q8TB33 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01560Q8TB33 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01560Q8TB33 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01560Q8TB33 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01560Q8TB33 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.19■□□□□ 0.82
LINC01560Q8TB33 SRD5A1P1-201ENST00000442297 786 ntBASIC20.19■□□□□ 0.82
LINC01560Q8TB33 AC004448.1-201ENST00000458332 883 ntBASIC20.19■□□□□ 0.82
LINC01560Q8TB33 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01560Q8TB33 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01560Q8TB33 AC142381.2-201ENST00000566120 298 ntBASIC20.19■□□□□ 0.82
LINC01560Q8TB33 AL136162.1-201ENST00000607711 1078 ntBASIC20.19■□□□□ 0.82
LINC01560Q8TB33 AC092803.2-201ENST00000564287 1899 ntBASIC20.19■□□□□ 0.82
LINC01560Q8TB33 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LINC01560Q8TB33 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01560Q8TB33 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01560Q8TB33 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC01560Q8TB33 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01560Q8TB33 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01560Q8TB33 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01560Q8TB33 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.17■□□□□ 0.82
LINC01560Q8TB33 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.17■□□□□ 0.82
LINC01560Q8TB33 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LINC01560Q8TB33 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01560Q8TB33 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01560Q8TB33 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LINC01560Q8TB33 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01560Q8TB33 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01560Q8TB33 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LINC01560Q8TB33 ZNRF2P3-201ENST00000424200 374 ntBASIC20.16■□□□□ 0.82
LINC01560Q8TB33 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.16■□□□□ 0.82
LINC01560Q8TB33 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01560Q8TB33 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.16■□□□□ 0.82
LINC01560Q8TB33 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01560Q8TB33 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01560Q8TB33 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LINC01560Q8TB33 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.15■□□□□ 0.82
LINC01560Q8TB33 AC135279.3-201ENST00000610945 1311 ntBASIC20.15■□□□□ 0.82
LINC01560Q8TB33 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01560Q8TB33 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LINC01560Q8TB33 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01560Q8TB33 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LINC01560Q8TB33 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 AC024257.2-201ENST00000549699 147 ntBASIC20.14■□□□□ 0.81
LINC01560Q8TB33 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 AL121749.1-202ENST00000609313 2153 ntBASIC20.14■□□□□ 0.81
LINC01560Q8TB33 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01560Q8TB33 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01560Q8TB33 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01560Q8TB33 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.13■□□□□ 0.81
LINC01560Q8TB33 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.13■□□□□ 0.81
LINC01560Q8TB33 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LINC01560Q8TB33 AC005703.6-201ENST00000623265 1329 ntBASIC20.13■□□□□ 0.81
LINC01560Q8TB33 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01560Q8TB33 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.13■□□□□ 0.81
LINC01560Q8TB33 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01560Q8TB33 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.13■□□□□ 0.81
LINC01560Q8TB33 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms