Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
RTL9Q8NET4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.89■■■□□ 2.22
RTL9Q8NET4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
RTL9Q8NET4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.89■■■□□ 2.21
RTL9Q8NET4 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.88■■■□□ 2.21
RTL9Q8NET4 AC004448.1-201ENST00000458332 883 ntBASIC28.88■■■□□ 2.21
RTL9Q8NET4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC28.88■■■□□ 2.21
RTL9Q8NET4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
RTL9Q8NET4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.88■■■□□ 2.21
RTL9Q8NET4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.88■■■□□ 2.21
RTL9Q8NET4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
RTL9Q8NET4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RTL9Q8NET4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RTL9Q8NET4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.88■■■□□ 2.21
RTL9Q8NET4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.87■■■□□ 2.21
RTL9Q8NET4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTL9Q8NET4 SLC6A10P-202ENST00000431994 2058 ntBASIC28.87■■■□□ 2.21
RTL9Q8NET4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTL9Q8NET4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC28.87■■■□□ 2.21
RTL9Q8NET4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC28.87■■■□□ 2.21
RTL9Q8NET4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.86■■■□□ 2.21
RTL9Q8NET4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTL9Q8NET4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RTL9Q8NET4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.86■■■□□ 2.21
RTL9Q8NET4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RTL9Q8NET4 AC096631.2-201ENST00000436136 790 ntBASIC28.86■■■□□ 2.21
RTL9Q8NET4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RTL9Q8NET4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
RTL9Q8NET4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RTL9Q8NET4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RTL9Q8NET4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RTL9Q8NET4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RTL9Q8NET4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.85■■■□□ 2.21
RTL9Q8NET4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC28.85■■■□□ 2.21
RTL9Q8NET4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.84■■■□□ 2.21
RTL9Q8NET4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RTL9Q8NET4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.84■■■□□ 2.21
RTL9Q8NET4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RTL9Q8NET4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTL9Q8NET4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
RTL9Q8NET4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RTL9Q8NET4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RTL9Q8NET4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTL9Q8NET4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTL9Q8NET4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTL9Q8NET4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTL9Q8NET4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RTL9Q8NET4 AC091060.1-201ENST00000623524 1766 ntBASIC28.83■■■□□ 2.21
RTL9Q8NET4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTL9Q8NET4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.82■■■□□ 2.2
RTL9Q8NET4 AC005837.3-201ENST00000612163 286 ntBASIC28.82■■■□□ 2.2
RTL9Q8NET4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
RTL9Q8NET4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTL9Q8NET4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTL9Q8NET4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTL9Q8NET4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTL9Q8NET4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC28.81■■■□□ 2.2
RTL9Q8NET4 AC145676.1-201ENST00000514988 2004 ntBASIC28.81■■■□□ 2.2
RTL9Q8NET4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTL9Q8NET4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
RTL9Q8NET4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RTL9Q8NET4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RTL9Q8NET4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RTL9Q8NET4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RTL9Q8NET4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RTL9Q8NET4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RTL9Q8NET4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RTL9Q8NET4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.79■■■□□ 2.2
RTL9Q8NET4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
RTL9Q8NET4 AC131274.2-201ENST00000580697 1507 ntBASIC28.79■■■□□ 2.2
RTL9Q8NET4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
RTL9Q8NET4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.78■■■□□ 2.2
RTL9Q8NET4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RTL9Q8NET4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
RTL9Q8NET4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RTL9Q8NET4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.77■■■□□ 2.2
RTL9Q8NET4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
RTL9Q8NET4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
RTL9Q8NET4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.76■■■□□ 2.19
RTL9Q8NET4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
RTL9Q8NET4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RTL9Q8NET4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
RTL9Q8NET4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.76■■■□□ 2.19
RTL9Q8NET4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.75■■■□□ 2.19
RTL9Q8NET4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
RTL9Q8NET4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.75■■■□□ 2.19
RTL9Q8NET4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTL9Q8NET4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
RTL9Q8NET4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
RTL9Q8NET4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
RTL9Q8NET4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RTL9Q8NET4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
RTL9Q8NET4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RTL9Q8NET4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RTL9Q8NET4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC28.73■■■□□ 2.19
RTL9Q8NET4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC28.73■■■□□ 2.19
RTL9Q8NET4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
RTL9Q8NET4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.72■■■□□ 2.19
RTL9Q8NET4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTL9Q8NET4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 422.3 ms