Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPEB3Q8NE35 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPEB3Q8NE35 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CPEB3Q8NE35 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPEB3Q8NE35 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPEB3Q8NE35 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.28■□□□□ 0.84
CPEB3Q8NE35 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPEB3Q8NE35 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPEB3Q8NE35 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
CPEB3Q8NE35 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPEB3Q8NE35 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
CPEB3Q8NE35 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPEB3Q8NE35 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CPEB3Q8NE35 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPEB3Q8NE35 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPEB3Q8NE35 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.27■□□□□ 0.84
CPEB3Q8NE35 THA1P-201ENST00000590384 1145 ntBASIC20.27■□□□□ 0.84
CPEB3Q8NE35 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.27■□□□□ 0.84
CPEB3Q8NE35 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CPEB3Q8NE35 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPEB3Q8NE35 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPEB3Q8NE35 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.26■□□□□ 0.83
CPEB3Q8NE35 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPEB3Q8NE35 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.26■□□□□ 0.83
CPEB3Q8NE35 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPEB3Q8NE35 LINC01124-201ENST00000409786 2117 ntBASIC20.26■□□□□ 0.83
CPEB3Q8NE35 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CPEB3Q8NE35 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 RARRES2P1-201ENST00000474487 481 ntBASIC20.25■□□□□ 0.83
CPEB3Q8NE35 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPEB3Q8NE35 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPEB3Q8NE35 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.24■□□□□ 0.83
CPEB3Q8NE35 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPEB3Q8NE35 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPEB3Q8NE35 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPEB3Q8NE35 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPEB3Q8NE35 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPEB3Q8NE35 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPEB3Q8NE35 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.23■□□□□ 0.83
CPEB3Q8NE35 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
CPEB3Q8NE35 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPEB3Q8NE35 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.23■□□□□ 0.83
CPEB3Q8NE35 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPEB3Q8NE35 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPEB3Q8NE35 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPEB3Q8NE35 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPEB3Q8NE35 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPEB3Q8NE35 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPEB3Q8NE35 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.22■□□□□ 0.83
CPEB3Q8NE35 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPEB3Q8NE35 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CPEB3Q8NE35 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPEB3Q8NE35 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.22■□□□□ 0.83
CPEB3Q8NE35 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.22■□□□□ 0.83
CPEB3Q8NE35 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.21■□□□□ 0.83
CPEB3Q8NE35 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPEB3Q8NE35 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPEB3Q8NE35 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPEB3Q8NE35 MIR4281-201ENST00000580852 62 ntBASIC20.21■□□□□ 0.83
CPEB3Q8NE35 AL031848.2-201ENST00000607670 837 ntBASIC20.21■□□□□ 0.83
CPEB3Q8NE35 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPEB3Q8NE35 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPEB3Q8NE35 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CPEB3Q8NE35 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPEB3Q8NE35 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CPEB3Q8NE35 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPEB3Q8NE35 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPEB3Q8NE35 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CPEB3Q8NE35 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPEB3Q8NE35 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPEB3Q8NE35 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPEB3Q8NE35 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
CPEB3Q8NE35 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPEB3Q8NE35 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.18■□□□□ 0.82
CPEB3Q8NE35 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms