Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC71LQ8N9Z2 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.26■□□□□ 0.67
CCDC71LQ8N9Z2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71LQ8N9Z2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71LQ8N9Z2 HLA-L-211ENST00000482052 1765 ntBASIC19.25■□□□□ 0.67
CCDC71LQ8N9Z2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC71LQ8N9Z2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC71LQ8N9Z2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71LQ8N9Z2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC71LQ8N9Z2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC71LQ8N9Z2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC71LQ8N9Z2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71LQ8N9Z2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71LQ8N9Z2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71LQ8N9Z2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCDC71LQ8N9Z2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC71LQ8N9Z2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC71LQ8N9Z2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71LQ8N9Z2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71LQ8N9Z2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC71LQ8N9Z2 AC025884.2-201ENST00000553429 711 ntBASIC19.22■□□□□ 0.67
CCDC71LQ8N9Z2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC71LQ8N9Z2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC71LQ8N9Z2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC71LQ8N9Z2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC71LQ8N9Z2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC71LQ8N9Z2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC71LQ8N9Z2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC71LQ8N9Z2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC71LQ8N9Z2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71LQ8N9Z2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC71LQ8N9Z2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71LQ8N9Z2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC71LQ8N9Z2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC71LQ8N9Z2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71LQ8N9Z2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71LQ8N9Z2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71LQ8N9Z2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71LQ8N9Z2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71LQ8N9Z2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71LQ8N9Z2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC71LQ8N9Z2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71LQ8N9Z2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71LQ8N9Z2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC71LQ8N9Z2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 CR559946.2-201ENST00000623684 991 ntBASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71LQ8N9Z2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 ZNRF2P2-203ENST00000454624 420 ntBASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 AL157400.5-201ENST00000507624 621 ntBASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71LQ8N9Z2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71LQ8N9Z2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms