Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAM1L1Q8N609 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TRAM1L1Q8N609 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAM1L1Q8N609 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRAM1L1Q8N609 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.05■■□□□ 1.28
TRAM1L1Q8N609 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.05■■□□□ 1.28
TRAM1L1Q8N609 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 HLA-L-211ENST00000482052 1765 ntBASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAM1L1Q8N609 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAM1L1Q8N609 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAM1L1Q8N609 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRAM1L1Q8N609 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRAM1L1Q8N609 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRAM1L1Q8N609 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.03■■□□□ 1.28
TRAM1L1Q8N609 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.03■■□□□ 1.28
TRAM1L1Q8N609 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAM1L1Q8N609 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRAM1L1Q8N609 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRAM1L1Q8N609 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.02■■□□□ 1.28
TRAM1L1Q8N609 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRAM1L1Q8N609 MIR4787-201ENST00000607364 84 ntBASIC23.02■■□□□ 1.28
TRAM1L1Q8N609 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRAM1L1Q8N609 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAM1L1Q8N609 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRAM1L1Q8N609 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRAM1L1Q8N609 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAM1L1Q8N609 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAM1L1Q8N609 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.01■■□□□ 1.27
TRAM1L1Q8N609 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.01■■□□□ 1.27
TRAM1L1Q8N609 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAM1L1Q8N609 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAM1L1Q8N609 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23■■□□□ 1.27
TRAM1L1Q8N609 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
TRAM1L1Q8N609 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRAM1L1Q8N609 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23■■□□□ 1.27
TRAM1L1Q8N609 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRAM1L1Q8N609 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23■■□□□ 1.27
TRAM1L1Q8N609 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.99■■□□□ 1.27
TRAM1L1Q8N609 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAM1L1Q8N609 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRAM1L1Q8N609 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAM1L1Q8N609 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRAM1L1Q8N609 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TRAM1L1Q8N609 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAM1L1Q8N609 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRAM1L1Q8N609 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAM1L1Q8N609 GUSBP5-201ENST00000418136 578 ntBASIC22.97■■□□□ 1.27
TRAM1L1Q8N609 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.97■■□□□ 1.27
TRAM1L1Q8N609 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAM1L1Q8N609 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.97■■□□□ 1.27
TRAM1L1Q8N609 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAM1L1Q8N609 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAM1L1Q8N609 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 AC092028.1-203ENST00000608262 953 ntBASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRAM1L1Q8N609 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRAM1L1Q8N609 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TRAM1L1Q8N609 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.95■■□□□ 1.26
TRAM1L1Q8N609 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
TRAM1L1Q8N609 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TRAM1L1Q8N609 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.95■■□□□ 1.26
TRAM1L1Q8N609 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRAM1L1Q8N609 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRAM1L1Q8N609 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
TRAM1L1Q8N609 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.94■■□□□ 1.26
TRAM1L1Q8N609 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
TRAM1L1Q8N609 AC131274.2-201ENST00000580697 1507 ntBASIC22.93■■□□□ 1.26
TRAM1L1Q8N609 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
TRAM1L1Q8N609 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.93■■□□□ 1.26
TRAM1L1Q8N609 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.93■■□□□ 1.26
TRAM1L1Q8N609 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms