Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
C11orf42Q8N5U0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.23■□□□□ 0.67
C11orf42Q8N5U0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.23■□□□□ 0.67
C11orf42Q8N5U0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
C11orf42Q8N5U0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
C11orf42Q8N5U0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C11orf42Q8N5U0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C11orf42Q8N5U0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C11orf42Q8N5U0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.22■□□□□ 0.67
C11orf42Q8N5U0 AC142381.3-201ENST00000568208 1670 ntBASIC19.22■□□□□ 0.67
C11orf42Q8N5U0 AC011551.1-201ENST00000614101 683 ntBASIC19.22■□□□□ 0.67
C11orf42Q8N5U0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.22■□□□□ 0.67
C11orf42Q8N5U0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.22■□□□□ 0.67
C11orf42Q8N5U0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C11orf42Q8N5U0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C11orf42Q8N5U0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C11orf42Q8N5U0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C11orf42Q8N5U0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C11orf42Q8N5U0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C11orf42Q8N5U0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C11orf42Q8N5U0 AC138932.3-201ENST00000567634 1902 ntBASIC19.21■□□□□ 0.67
C11orf42Q8N5U0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C11orf42Q8N5U0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf42Q8N5U0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf42Q8N5U0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf42Q8N5U0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.19■□□□□ 0.66
C11orf42Q8N5U0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
C11orf42Q8N5U0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.19■□□□□ 0.66
C11orf42Q8N5U0 THA1P-201ENST00000590384 1145 ntBASIC19.19■□□□□ 0.66
C11orf42Q8N5U0 AL031848.2-201ENST00000607670 837 ntBASIC19.19■□□□□ 0.66
C11orf42Q8N5U0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.19■□□□□ 0.66
C11orf42Q8N5U0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.19■□□□□ 0.66
C11orf42Q8N5U0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.19■□□□□ 0.66
C11orf42Q8N5U0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
C11orf42Q8N5U0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C11orf42Q8N5U0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.18■□□□□ 0.66
C11orf42Q8N5U0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C11orf42Q8N5U0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.18■□□□□ 0.66
C11orf42Q8N5U0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C11orf42Q8N5U0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C11orf42Q8N5U0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
C11orf42Q8N5U0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C11orf42Q8N5U0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
C11orf42Q8N5U0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 AL451085.2-201ENST00000605085 799 ntBASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
C11orf42Q8N5U0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf42Q8N5U0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.16■□□□□ 0.66
C11orf42Q8N5U0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf42Q8N5U0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf42Q8N5U0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf42Q8N5U0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf42Q8N5U0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf42Q8N5U0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.16■□□□□ 0.66
C11orf42Q8N5U0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf42Q8N5U0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.15■□□□□ 0.66
C11orf42Q8N5U0 AP003733.4-201ENST00000623785 1697 ntBASIC19.15■□□□□ 0.66
C11orf42Q8N5U0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf42Q8N5U0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.15■□□□□ 0.66
C11orf42Q8N5U0 MIR4281-201ENST00000580852 62 ntBASIC19.15■□□□□ 0.66
C11orf42Q8N5U0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.15■□□□□ 0.66
C11orf42Q8N5U0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
C11orf42Q8N5U0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf42Q8N5U0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
C11orf42Q8N5U0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
C11orf42Q8N5U0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.14■□□□□ 0.65
C11orf42Q8N5U0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C11orf42Q8N5U0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.14■□□□□ 0.65
C11orf42Q8N5U0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
C11orf42Q8N5U0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
C11orf42Q8N5U0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C11orf42Q8N5U0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
C11orf42Q8N5U0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C11orf42Q8N5U0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
C11orf42Q8N5U0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C11orf42Q8N5U0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C11orf42Q8N5U0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C11orf42Q8N5U0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.13■□□□□ 0.65
C11orf42Q8N5U0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C11orf42Q8N5U0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C11orf42Q8N5U0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C11orf42Q8N5U0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms