Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST3H2BBQ8N257 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST3H2BBQ8N257 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC17.52■□□□□ 0.4
HIST3H2BBQ8N257 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HIST3H2BBQ8N257 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HIST3H2BBQ8N257 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.52■□□□□ 0.39
HIST3H2BBQ8N257 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 WASH5P-204ENST00000632292 975 ntBASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST3H2BBQ8N257 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST3H2BBQ8N257 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 AF106564.1-201ENST00000607058 2553 ntBASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HIST3H2BBQ8N257 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2BBQ8N257 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2BBQ8N257 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2BBQ8N257 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.48■□□□□ 0.39
HIST3H2BBQ8N257 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2BBQ8N257 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2BBQ8N257 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST3H2BBQ8N257 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST3H2BBQ8N257 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST3H2BBQ8N257 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST3H2BBQ8N257 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HIST3H2BBQ8N257 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
HIST3H2BBQ8N257 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST3H2BBQ8N257 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HIST3H2BBQ8N257 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.46■□□□□ 0.39
HIST3H2BBQ8N257 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HIST3H2BBQ8N257 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.46■□□□□ 0.38
HIST3H2BBQ8N257 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.46■□□□□ 0.38
HIST3H2BBQ8N257 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
HIST3H2BBQ8N257 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HIST3H2BBQ8N257 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST3H2BBQ8N257 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.44■□□□□ 0.38
HIST3H2BBQ8N257 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.44■□□□□ 0.38
HIST3H2BBQ8N257 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.44■□□□□ 0.38
HIST3H2BBQ8N257 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HIST3H2BBQ8N257 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.44■□□□□ 0.38
HIST3H2BBQ8N257 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.44■□□□□ 0.38
HIST3H2BBQ8N257 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
HIST3H2BBQ8N257 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms