Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 COLGALT1-202ENST00000593832 2941 ntTSL 222.02■■□□□ 1.129e-10■■■■□ 19.5
PABPN1Q86U42 GNL1-204ENST00000464231 545 ntTSL 1 (best)21.9■■□□□ 1.19e-10■■■■□ 19.5
PABPN1Q86U42 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.79e-10■■■■□ 19.5
PABPN1Q86U42 NT5DC2-204ENST00000462261 1619 ntTSL 228.92■■■□□ 2.221e-6■■■■□ 19.5
PABPN1Q86U42 NT5DC2-205ENST00000463947 670 ntTSL 327.85■■■□□ 2.051e-6■■■■□ 19.5
PABPN1Q86U42 NT5DC2-210ENST00000479024 1714 ntTSL 226.17■■□□□ 1.781e-6■■■■□ 19.5
PABPN1Q86U42 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.897e-7■■■■□ 19.4
PABPN1Q86U42 GCN1-206ENST00000549815 543 ntTSL 327.79■■■□□ 2.042e-7■■■■□ 19.4
PABPN1Q86U42 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC50.46■■■■■ 5.674e-9■■■■□ 19.4
PABPN1Q86U42 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.984e-9■■■■□ 19.4
PABPN1Q86U42 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC34.72■■■■□ 3.154e-9■■■■□ 19.4
PABPN1Q86U42 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC27.37■■□□□ 1.974e-9■■■■□ 19.4
PABPN1Q86U42 EXOC7-218ENST00000591724 353 ntTSL 522.76■■□□□ 1.233e-7■■■■□ 19.4
PABPN1Q86U42 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.989e-8■■■■□ 19.4
PABPN1Q86U42 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC27.1■■□□□ 1.939e-8■■■■□ 19.4
PABPN1Q86U42 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.799e-8■■■■□ 19.4
PABPN1Q86U42 SEMA3B-214ENST00000619119 3158 ntTSL 525.57■■□□□ 1.689e-8■■■■□ 19.4
PABPN1Q86U42 INTS11-222ENST00000497304 932 ntTSL 1 (best)37.54■■■■□ 3.65e-7■■■■□ 19.4
PABPN1Q86U42 NCAPH2-206ENST00000518394 720 ntTSL 531.07■■■□□ 2.562e-7■■■■□ 19.4
PABPN1Q86U42 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.25e-7■■■■□ 19.4
PABPN1Q86U42 LCAT-205ENST00000573538 1083 ntTSL 331.87■■■□□ 2.695e-7■■■■□ 19.4
PABPN1Q86U42 LCAT-202ENST00000570369 348 ntTSL 226.08■■□□□ 1.775e-7■■■■□ 19.4
PABPN1Q86U42 CNDP2-208ENST00000579624 1176 ntTSL 516.67■□□□□ 0.262e-6■■■■□ 19.4
PABPN1Q86U42 FANCA-224ENST00000567510 461 ntTSL 312.75□□□□□ -0.372e-7■■■■□ 19.3
PABPN1Q86U42 ASL-206ENST00000464970 640 ntTSL 330.61■■■□□ 2.492e-10■■■■□ 19.3
PABPN1Q86U42 CENPT-234ENST00000574569 897 ntTSL 229.98■■■□□ 2.392e-7■■■■□ 19.3
PABPN1Q86U42 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC37.03■■■■□ 3.525e-7■■■■□ 19.3
PABPN1Q86U42 MTG1-204ENST00000473735 2212 ntTSL 536.64■■■■□ 3.465e-7■■■■□ 19.3
PABPN1Q86U42 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.275e-7■■■■□ 19.3
PABPN1Q86U42 MTG1-202ENST00000432508 953 ntTSL 233■■■□□ 2.875e-7■■■■□ 19.3
PABPN1Q86U42 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.765e-7■■■■□ 19.3
PABPN1Q86U42 MTG1-203ENST00000460848 2730 ntTSL 221.36■■□□□ 1.015e-7■■■■□ 19.3
PABPN1Q86U42 LPIN3-203ENST00000491528 652 ntTSL 220.48■□□□□ 0.873e-7■■■■□ 19.3
PABPN1Q86U42 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC32.85■■■□□ 2.852e-6■■■■□ 19.3
PABPN1Q86U42 NASP-214ENST00000527932 650 ntTSL 314.19□□□□□ -0.149e-12■■■■□ 19.3
PABPN1Q86U42 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.931e-6■■■■□ 19.3
PABPN1Q86U42 COQ4-203ENST00000461102 3127 ntTSL 217.77■□□□□ 0.431e-6■■■■□ 19.3
PABPN1Q86U42 MMS19-219ENST00000495415 1879 ntTSL 524.85■■□□□ 1.575e-7■■■■□ 19.3
PABPN1Q86U42 RNF123-208ENST00000469978 889 ntTSL 327.59■■■□□ 2.019e-11■■■□□ 19.2
PABPN1Q86U42 MYOM3-203ENST00000448831 418 ntTSL 321.91■■□□□ 1.18e-16■■■□□ 19.2
PABPN1Q86U42 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC20.58■□□□□ 0.888e-16■■■□□ 19.2
PABPN1Q86U42 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.658e-16■■■□□ 19.2
PABPN1Q86U42 SLC38A5-206ENST00000480105 894 ntTSL 224.44■■□□□ 1.58e-8■■■□□ 19.2
PABPN1Q86U42 SEMA3B-201ENST00000416295 1088 ntTSL 535.53■■■■□ 3.286e-8■■■□□ 19.2
PABPN1Q86U42 HEXDC-205ENST00000578616 862 ntTSL 326.68■■□□□ 1.868e-7■■■□□ 19.2
PABPN1Q86U42 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC42.37■■■■■ 4.373e-6■■■□□ 19.2
PABPN1Q86U42 FBRSL1-206ENST00000542306 1246 ntTSL 540.12■■■■■ 4.013e-6■■■□□ 19.2
PABPN1Q86U42 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.233e-6■■■□□ 19.2
PABPN1Q86U42 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.973e-6■■■□□ 19.2
PABPN1Q86U42 RBM10-203ENST00000377604 3747 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.543e-6■■■□□ 19.2
PABPN1Q86U42 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.513e-6■■■□□ 19.2
PABPN1Q86U42 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC36.13■■■■□ 3.371e-6■■■□□ 19.2
PABPN1Q86U42 PSME2-205ENST00000559005 496 ntTSL 216.02■□□□□ 0.167e-13■■■□□ 19.2
PABPN1Q86U42 RHOT2-221ENST00000569358 1273 ntTSL 542.51■■■■■ 4.42e-7■■■□□ 19.2
PABPN1Q86U42 NRDC-212ENST00000497358 700 ntTSL 317.68■□□□□ 0.422e-6■■■□□ 19.2
PABPN1Q86U42 DMPK-207ENST00000593574 548 ntTSL 442.01■■■■■ 4.323e-6■■■□□ 19.1
PABPN1Q86U42 HSF4-222ENST00000522870 1599 ntTSL 544.94■■■■■ 4.796e-10■■■□□ 19.1
PABPN1Q86U42 HSF4-208ENST00000519224 637 ntTSL 527.03■■□□□ 1.926e-10■■■□□ 19.1
PABPN1Q86U42 PPP6R2-208ENST00000473283 550 ntTSL 429.36■■■□□ 2.293e-7■■■□□ 19.1
PABPN1Q86U42 APOL1-202ENST00000397278 2918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.275e-7■■■□□ 19.1
PABPN1Q86U42 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.185e-7■■■□□ 19.1
PABPN1Q86U42 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.115e-7■■■□□ 19.1
PABPN1Q86U42 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.065e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-208ENST00000470787 1544 ntTSL 241.3■■■■■ 4.21e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC40.28■■■■■ 4.041e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-211ENST00000477070 1521 ntTSL 540.11■■■■■ 4.011e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-203ENST00000412341 1916 ntTSL 537.51■■■■□ 3.591e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.281e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-210ENST00000476503 1006 ntAPPRIS ALT2 TSL 333.49■■■□□ 2.951e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.611e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-227ENST00000533927 2026 ntTSL 1 (best)30.22■■■□□ 2.431e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-205ENST00000462037 827 ntTSL 226.59■■□□□ 1.851e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-213ENST00000482023 851 ntTSL 523.4■■□□□ 1.341e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-206ENST00000463519 2704 ntTSL 1 (best)22.51■■□□□ 1.191e-7■■■□□ 19.1
PABPN1Q86U42 ZNF692-209ENST00000474351 867 ntTSL 218.37■□□□□ 0.531e-7■■■□□ 19.1
PABPN1Q86U42 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC41.61■■■■■ 4.256e-7■■■□□ 19.1
PABPN1Q86U42 AKAP8L-203ENST00000594594 2251 ntTSL 534.08■■■■□ 3.056e-7■■■□□ 19.1
PABPN1Q86U42 AKAP8L-220ENST00000609519 2113 ntTSL 233.06■■■□□ 2.886e-7■■■□□ 19.1
PABPN1Q86U42 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.86e-7■■■□□ 19.1
PABPN1Q86U42 AKAP8L-202ENST00000593845 2749 ntTSL 228.35■■■□□ 2.136e-7■■■□□ 19.1
PABPN1Q86U42 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.432e-6■■■□□ 19.1
PABPN1Q86U42 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.212e-6■■■□□ 19.1
PABPN1Q86U42 IPO4-215ENST00000560935 701 ntTSL 340.38■■■■■ 4.059e-7■■■□□ 19.1
PABPN1Q86U42 B4GALNT4-203ENST00000526584 421 ntTSL 335.68■■■■□ 3.37e-7■■■□□ 19.1
PABPN1Q86U42 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.729e-7■■■□□ 19
PABPN1Q86U42 PRKRIP1-206ENST00000482465 2257 ntTSL 225.67■■□□□ 1.79e-7■■■□□ 19
PABPN1Q86U42 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.319e-7■■■□□ 19
PABPN1Q86U42 RNF123-210ENST00000487805 5882 ntTSL 219.65■□□□□ 0.749e-7■■■□□ 19
PABPN1Q86U42 RNF123-209ENST00000486102 4564 ntTSL 1 (best)18.41■□□□□ 0.549e-7■■■□□ 19
PABPN1Q86U42 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.259e-7■■■□□ 19
PABPN1Q86U42 RNF123-207ENST00000457726 4506 ntTSL 1 (best)16.06■□□□□ 0.169e-7■■■□□ 19
PABPN1Q86U42 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC35.48■■■■□ 3.271e-6■■■□□ 19
PABPN1Q86U42 INO80E-205ENST00000562441 1412 ntTSL 234.9■■■■□ 3.181e-6■■■□□ 19
PABPN1Q86U42 INO80E-211ENST00000567987 1926 ntTSL 1 (best)33.76■■■□□ 2.991e-6■■■□□ 19
PABPN1Q86U42 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.741e-6■■■□□ 19
PABPN1Q86U42 INO80E-203ENST00000540562 3064 ntTSL 222.12■■□□□ 1.131e-6■■■□□ 19
PABPN1Q86U42 INO80E-213ENST00000569957 4469 ntTSL 219.53■□□□□ 0.721e-6■■■□□ 19
PABPN1Q86U42 LUC7L-211ENST00000442701 423 ntTSL 338.67■■■■□ 3.781e-7■■■□□ 19
PABPN1Q86U42 AGXT-202ENST00000470255 2638 ntTSL 226.9■■□□□ 1.92e-8■■■□□ 19
PABPN1Q86U42 LMBR1L-218ENST00000551143 578 ntTSL 324.01■■□□□ 1.431e-10■■■□□ 19
Retrieved 100 of 8,254 protein–RNA pairs in 298.7 ms