Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.96■□□□□ 0.95
HDDC2Q7Z4H3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDDC2Q7Z4H3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDDC2Q7Z4H3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HDDC2Q7Z4H3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HDDC2Q7Z4H3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDDC2Q7Z4H3 SPCS2P3-201ENST00000500401 656 ntBASIC20.95■□□□□ 0.94
HDDC2Q7Z4H3 NTF6A-201ENST00000591175 560 ntBASIC20.95■□□□□ 0.94
HDDC2Q7Z4H3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDDC2Q7Z4H3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDDC2Q7Z4H3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.95■□□□□ 0.94
HDDC2Q7Z4H3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDDC2Q7Z4H3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDDC2Q7Z4H3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDDC2Q7Z4H3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDDC2Q7Z4H3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.94■□□□□ 0.94
HDDC2Q7Z4H3 AC129492.7-201ENST00000622992 756 ntBASIC20.94■□□□□ 0.94
HDDC2Q7Z4H3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDDC2Q7Z4H3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
HDDC2Q7Z4H3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDDC2Q7Z4H3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDDC2Q7Z4H3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HDDC2Q7Z4H3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.93■□□□□ 0.94
HDDC2Q7Z4H3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDDC2Q7Z4H3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDDC2Q7Z4H3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.93■□□□□ 0.94
HDDC2Q7Z4H3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.93■□□□□ 0.94
HDDC2Q7Z4H3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HDDC2Q7Z4H3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HDDC2Q7Z4H3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.93■□□□□ 0.94
HDDC2Q7Z4H3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 KRT18P60-201ENST00000312876 1297 ntBASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDDC2Q7Z4H3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDDC2Q7Z4H3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HDDC2Q7Z4H3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDDC2Q7Z4H3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDDC2Q7Z4H3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDDC2Q7Z4H3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDDC2Q7Z4H3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.91■□□□□ 0.94
HDDC2Q7Z4H3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.91■□□□□ 0.94
HDDC2Q7Z4H3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HDDC2Q7Z4H3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.91■□□□□ 0.94
HDDC2Q7Z4H3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDDC2Q7Z4H3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HDDC2Q7Z4H3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDDC2Q7Z4H3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDDC2Q7Z4H3 AL592295.1-201ENST00000400984 884 ntBASIC20.9■□□□□ 0.94
HDDC2Q7Z4H3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.9■□□□□ 0.94
HDDC2Q7Z4H3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDDC2Q7Z4H3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDDC2Q7Z4H3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.9■□□□□ 0.94
HDDC2Q7Z4H3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
HDDC2Q7Z4H3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDDC2Q7Z4H3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 AL139125.2-201ENST00000623134 1869 ntBASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HDDC2Q7Z4H3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDDC2Q7Z4H3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.87■□□□□ 0.93
HDDC2Q7Z4H3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDDC2Q7Z4H3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.87■□□□□ 0.93
HDDC2Q7Z4H3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HDDC2Q7Z4H3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.87■□□□□ 0.93
HDDC2Q7Z4H3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
HDDC2Q7Z4H3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDDC2Q7Z4H3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.87■□□□□ 0.93
HDDC2Q7Z4H3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.87■□□□□ 0.93
HDDC2Q7Z4H3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 AC141586.4-201ENST00000624558 1573 ntBASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 AC139795.1-202ENST00000500444 432 ntBASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.86■□□□□ 0.93
HDDC2Q7Z4H3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms