Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA2Q6UWI4 AC090877.2-201ENST00000558441 1738 ntBASIC18.1■□□□□ 0.49
SHISA2Q6UWI4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA2Q6UWI4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA2Q6UWI4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA2Q6UWI4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.1■□□□□ 0.49
SHISA2Q6UWI4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SHISA2Q6UWI4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA2Q6UWI4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SHISA2Q6UWI4 AC005703.6-201ENST00000623265 1329 ntBASIC18.09■□□□□ 0.49
SHISA2Q6UWI4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.09■□□□□ 0.49
SHISA2Q6UWI4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA2Q6UWI4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.09■□□□□ 0.49
SHISA2Q6UWI4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.09■□□□□ 0.49
SHISA2Q6UWI4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.09■□□□□ 0.49
SHISA2Q6UWI4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHISA2Q6UWI4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHISA2Q6UWI4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHISA2Q6UWI4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHISA2Q6UWI4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHISA2Q6UWI4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHISA2Q6UWI4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHISA2Q6UWI4 AC090192.1-201ENST00000517740 490 ntBASIC18.08■□□□□ 0.48
SHISA2Q6UWI4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.08■□□□□ 0.48
SHISA2Q6UWI4 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.08■□□□□ 0.48
SHISA2Q6UWI4 RARRES2P11-201ENST00000635158 484 ntBASIC18.08■□□□□ 0.48
SHISA2Q6UWI4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHISA2Q6UWI4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHISA2Q6UWI4 AP004609.3-201ENST00000610705 1884 ntBASIC18.07■□□□□ 0.48
SHISA2Q6UWI4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SHISA2Q6UWI4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHISA2Q6UWI4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SHISA2Q6UWI4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA2Q6UWI4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SHISA2Q6UWI4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA2Q6UWI4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.06■□□□□ 0.48
SHISA2Q6UWI4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA2Q6UWI4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA2Q6UWI4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA2Q6UWI4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA2Q6UWI4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHISA2Q6UWI4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHISA2Q6UWI4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHISA2Q6UWI4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.05■□□□□ 0.48
SHISA2Q6UWI4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHISA2Q6UWI4 AL138724.1-201ENST00000606771 1088 ntBASIC18.05■□□□□ 0.48
SHISA2Q6UWI4 AC011298.3-201ENST00000615796 283 ntBASIC18.05■□□□□ 0.48
SHISA2Q6UWI4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.05■□□□□ 0.48
SHISA2Q6UWI4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHISA2Q6UWI4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 AC008764.7-201ENST00000593779 1081 ntBASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 AL137784.2-201ENST00000607332 1000 ntBASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.04■□□□□ 0.48
SHISA2Q6UWI4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHISA2Q6UWI4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SHISA2Q6UWI4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHISA2Q6UWI4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.02■□□□□ 0.48
SHISA2Q6UWI4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHISA2Q6UWI4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.02■□□□□ 0.48
SHISA2Q6UWI4 SERBP1P1-201ENST00000396021 1160 ntBASIC18.02■□□□□ 0.48
SHISA2Q6UWI4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.02■□□□□ 0.48
SHISA2Q6UWI4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.02■□□□□ 0.48
SHISA2Q6UWI4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.02■□□□□ 0.48
SHISA2Q6UWI4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHISA2Q6UWI4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 AC099791.1-201ENST00000416440 715 ntBASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 AC034268.1-201ENST00000441047 882 ntBASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHISA2Q6UWI4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms