Protein–RNA interactions for Protein: Q6P435

Putative uncharacterized SMG1-like protein, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q6P435 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Q6P435 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q6P435 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Q6P435 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Q6P435 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q6P435 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Q6P435 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q6P435 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Q6P435 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Q6P435 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q6P435 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q6P435 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.46■□□□□ 0.71
Q6P435 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Q6P435 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q6P435 ABCB10P4-201ENST00000566803 2184 ntBASIC19.46■□□□□ 0.71
Q6P435 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.46■□□□□ 0.71
Q6P435 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q6P435 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q6P435 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q6P435 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.45■□□□□ 0.7
Q6P435 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q6P435 AC019171.1-201ENST00000601251 1056 ntBASIC19.45■□□□□ 0.7
Q6P435 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q6P435 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q6P435 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q6P435 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Q6P435 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q6P435 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.44■□□□□ 0.7
Q6P435 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.44■□□□□ 0.7
Q6P435 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q6P435 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q6P435 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Q6P435 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q6P435 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q6P435 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.44■□□□□ 0.7
Q6P435 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Q6P435 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q6P435 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q6P435 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
Q6P435 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q6P435 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q6P435 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q6P435 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q6P435 AC004987.1-201ENST00000428627 508 ntBASIC19.43■□□□□ 0.7
Q6P435 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.43■□□□□ 0.7
Q6P435 AC139795.1-202ENST00000500444 432 ntBASIC19.43■□□□□ 0.7
Q6P435 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q6P435 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Q6P435 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q6P435 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q6P435 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q6P435 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q6P435 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.42■□□□□ 0.7
Q6P435 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q6P435 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.42■□□□□ 0.7
Q6P435 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q6P435 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q6P435 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q6P435 ATP5G2P3-201ENST00000429083 425 ntBASIC19.42■□□□□ 0.7
Q6P435 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.42■□□□□ 0.7
Q6P435 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Q6P435 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q6P435 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q6P435 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q6P435 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
Q6P435 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.42■□□□□ 0.7
Q6P435 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q6P435 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Q6P435 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.41■□□□□ 0.7
Q6P435 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q6P435 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.41■□□□□ 0.7
Q6P435 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q6P435 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q6P435 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.41■□□□□ 0.7
Q6P435 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.41■□□□□ 0.7
Q6P435 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Q6P435 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Q6P435 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.41■□□□□ 0.7
Q6P435 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Q6P435 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q6P435 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Q6P435 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Q6P435 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Q6P435 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Q6P435 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Q6P435 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q6P435 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Q6P435 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
Q6P435 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q6P435 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q6P435 AC022616.5-201ENST00000518796 181 ntBASIC19.39■□□□□ 0.69
Q6P435 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Q6P435 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.39■□□□□ 0.69
Q6P435 AC011551.1-201ENST00000614101 683 ntBASIC19.39■□□□□ 0.69
Q6P435 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q6P435 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q6P435 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q6P435 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q6P435 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Q6P435 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms