Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TMEM53Q6P2H8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM53Q6P2H8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21■□□□□ 0.95
TMEM53Q6P2H8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TMEM53Q6P2H8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMEM53Q6P2H8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TMEM53Q6P2H8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM53Q6P2H8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM53Q6P2H8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM53Q6P2H8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM53Q6P2H8 KRT18P10-201ENST00000388836 1287 ntBASIC20.98■□□□□ 0.95
TMEM53Q6P2H8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.98■□□□□ 0.95
TMEM53Q6P2H8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEM53Q6P2H8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TMEM53Q6P2H8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TMEM53Q6P2H8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TMEM53Q6P2H8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEM53Q6P2H8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM53Q6P2H8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TMEM53Q6P2H8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM53Q6P2H8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM53Q6P2H8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM53Q6P2H8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM53Q6P2H8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM53Q6P2H8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM53Q6P2H8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM53Q6P2H8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM53Q6P2H8 AC018755.3-202ENST00000596210 929 ntBASIC20.96■□□□□ 0.95
TMEM53Q6P2H8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TMEM53Q6P2H8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM53Q6P2H8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 C1orf229-201ENST00000623686 2258 ntBASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.95■□□□□ 0.94
TMEM53Q6P2H8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TMEM53Q6P2H8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM53Q6P2H8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM53Q6P2H8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM53Q6P2H8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM53Q6P2H8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TMEM53Q6P2H8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.93■□□□□ 0.94
TMEM53Q6P2H8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM53Q6P2H8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 KRT18P60-201ENST00000312876 1297 ntBASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.92■□□□□ 0.94
TMEM53Q6P2H8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM53Q6P2H8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM53Q6P2H8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM53Q6P2H8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
TMEM53Q6P2H8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM53Q6P2H8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM53Q6P2H8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM53Q6P2H8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM53Q6P2H8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM53Q6P2H8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TMEM53Q6P2H8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms