Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.61■■□□□ 1.37
FNDC3BQ53EP0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.61■■□□□ 1.37
FNDC3BQ53EP0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3BQ53EP0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.61■■□□□ 1.37
FNDC3BQ53EP0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.61■■□□□ 1.37
FNDC3BQ53EP0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3BQ53EP0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3BQ53EP0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3BQ53EP0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FNDC3BQ53EP0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 AL136116.3-201ENST00000402907 1138 ntBASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FNDC3BQ53EP0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
FNDC3BQ53EP0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
FNDC3BQ53EP0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
FNDC3BQ53EP0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
FNDC3BQ53EP0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.59■■□□□ 1.37
FNDC3BQ53EP0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.59■■□□□ 1.37
FNDC3BQ53EP0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
FNDC3BQ53EP0 AC019069.1-201ENST00000610008 1333 ntBASIC23.59■■□□□ 1.37
FNDC3BQ53EP0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
FNDC3BQ53EP0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
FNDC3BQ53EP0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
FNDC3BQ53EP0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
FNDC3BQ53EP0 MIR6722-201ENST00000617286 78 ntBASIC23.58■■□□□ 1.37
FNDC3BQ53EP0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
FNDC3BQ53EP0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
FNDC3BQ53EP0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
FNDC3BQ53EP0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
FNDC3BQ53EP0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.57■■□□□ 1.36
FNDC3BQ53EP0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
FNDC3BQ53EP0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
FNDC3BQ53EP0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.56■■□□□ 1.36
FNDC3BQ53EP0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
FNDC3BQ53EP0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FNDC3BQ53EP0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.56■■□□□ 1.36
FNDC3BQ53EP0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.56■■□□□ 1.36
FNDC3BQ53EP0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FNDC3BQ53EP0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FNDC3BQ53EP0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
FNDC3BQ53EP0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
FNDC3BQ53EP0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
FNDC3BQ53EP0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.55■■□□□ 1.36
FNDC3BQ53EP0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.55■■□□□ 1.36
FNDC3BQ53EP0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.55■■□□□ 1.36
FNDC3BQ53EP0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
FNDC3BQ53EP0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FNDC3BQ53EP0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FNDC3BQ53EP0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.54■■□□□ 1.36
FNDC3BQ53EP0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.54■■□□□ 1.36
FNDC3BQ53EP0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.54■■□□□ 1.36
FNDC3BQ53EP0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.53■■□□□ 1.36
FNDC3BQ53EP0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.52■■□□□ 1.36
FNDC3BQ53EP0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
FNDC3BQ53EP0 AC004448.1-201ENST00000458332 883 ntBASIC23.52■■□□□ 1.36
FNDC3BQ53EP0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.52■■□□□ 1.36
FNDC3BQ53EP0 MIR4466-201ENST00000606121 54 ntBASIC23.52■■□□□ 1.36
FNDC3BQ53EP0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
FNDC3BQ53EP0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
FNDC3BQ53EP0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.52■■□□□ 1.36
FNDC3BQ53EP0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
FNDC3BQ53EP0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FNDC3BQ53EP0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
FNDC3BQ53EP0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.51■■□□□ 1.35
FNDC3BQ53EP0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.51■■□□□ 1.35
FNDC3BQ53EP0 MIR6089-201ENST00000616698 64 ntBASIC23.51■■□□□ 1.35
FNDC3BQ53EP0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.51■■□□□ 1.35
FNDC3BQ53EP0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.51■■□□□ 1.35
FNDC3BQ53EP0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FNDC3BQ53EP0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FNDC3BQ53EP0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
FNDC3BQ53EP0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.5■■□□□ 1.35
FNDC3BQ53EP0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
FNDC3BQ53EP0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
FNDC3BQ53EP0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
FNDC3BQ53EP0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.49■■□□□ 1.35
FNDC3BQ53EP0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.49■■□□□ 1.35
FNDC3BQ53EP0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.49■■□□□ 1.35
FNDC3BQ53EP0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
FNDC3BQ53EP0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FNDC3BQ53EP0 AL512631.2-201ENST00000604634 923 ntBASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms