Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.42■■□□□ 1.98
CERKLQ49MI3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CERKLQ49MI3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CERKLQ49MI3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.42■■□□□ 1.98
CERKLQ49MI3 MIR4466-201ENST00000606121 54 ntBASIC27.42■■□□□ 1.98
CERKLQ49MI3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.42■■□□□ 1.98
CERKLQ49MI3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
CERKLQ49MI3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CERKLQ49MI3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CERKLQ49MI3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
CERKLQ49MI3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
CERKLQ49MI3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CERKLQ49MI3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CERKLQ49MI3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.4■■□□□ 1.98
CERKLQ49MI3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.4■■□□□ 1.98
CERKLQ49MI3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.4■■□□□ 1.98
CERKLQ49MI3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CERKLQ49MI3 AC145676.1-201ENST00000514988 2004 ntBASIC27.4■■□□□ 1.98
CERKLQ49MI3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
CERKLQ49MI3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
CERKLQ49MI3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.39■■□□□ 1.98
CERKLQ49MI3 AL512631.2-201ENST00000604634 923 ntBASIC27.39■■□□□ 1.98
CERKLQ49MI3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.39■■□□□ 1.97
CERKLQ49MI3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CERKLQ49MI3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CERKLQ49MI3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CERKLQ49MI3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CERKLQ49MI3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC27.37■■□□□ 1.97
CERKLQ49MI3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.37■■□□□ 1.97
CERKLQ49MI3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC27.37■■□□□ 1.97
CERKLQ49MI3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.37■■□□□ 1.97
CERKLQ49MI3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.37■■□□□ 1.97
CERKLQ49MI3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
CERKLQ49MI3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CERKLQ49MI3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CERKLQ49MI3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CERKLQ49MI3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC27.36■■□□□ 1.97
CERKLQ49MI3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CERKLQ49MI3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.36■■□□□ 1.97
CERKLQ49MI3 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.36■■□□□ 1.97
CERKLQ49MI3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.36■■□□□ 1.97
CERKLQ49MI3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CERKLQ49MI3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CERKLQ49MI3 AC004448.1-201ENST00000458332 883 ntBASIC27.35■■□□□ 1.97
CERKLQ49MI3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.35■■□□□ 1.97
CERKLQ49MI3 AL139246.5-201ENST00000606645 996 ntBASIC27.35■■□□□ 1.97
CERKLQ49MI3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.35■■□□□ 1.97
CERKLQ49MI3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CERKLQ49MI3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
CERKLQ49MI3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.34■■□□□ 1.97
CERKLQ49MI3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CERKLQ49MI3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CERKLQ49MI3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.34■■□□□ 1.97
CERKLQ49MI3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CERKLQ49MI3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.34■■□□□ 1.97
CERKLQ49MI3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CERKLQ49MI3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CERKLQ49MI3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.33■■□□□ 1.97
CERKLQ49MI3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CERKLQ49MI3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CERKLQ49MI3 MIR638-201ENST00000385237 100 ntBASIC27.33■■□□□ 1.97
CERKLQ49MI3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CERKLQ49MI3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CERKLQ49MI3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
CERKLQ49MI3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.96
CERKLQ49MI3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.32■■□□□ 1.96
CERKLQ49MI3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CERKLQ49MI3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.32■■□□□ 1.96
CERKLQ49MI3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CERKLQ49MI3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.32■■□□□ 1.96
CERKLQ49MI3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.32■■□□□ 1.96
CERKLQ49MI3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CERKLQ49MI3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
CERKLQ49MI3 RALB-208ENST00000631312 311 ntTSL 5 BASIC27.31■■□□□ 1.96
CERKLQ49MI3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CERKLQ49MI3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.3■■□□□ 1.96
CERKLQ49MI3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CERKLQ49MI3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.3■■□□□ 1.96
CERKLQ49MI3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.3■■□□□ 1.96
CERKLQ49MI3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CERKLQ49MI3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.29■■□□□ 1.96
CERKLQ49MI3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CERKLQ49MI3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CERKLQ49MI3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CERKLQ49MI3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CERKLQ49MI3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CERKLQ49MI3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CERKLQ49MI3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
CERKLQ49MI3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
CERKLQ49MI3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.28■■□□□ 1.96
CERKLQ49MI3 MIR6089-201ENST00000616698 64 ntBASIC27.28■■□□□ 1.96
CERKLQ49MI3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.28■■□□□ 1.96
CERKLQ49MI3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CERKLQ49MI3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CERKLQ49MI3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CERKLQ49MI3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CERKLQ49MI3 AC096631.2-201ENST00000436136 790 ntBASIC27.27■■□□□ 1.96
CERKLQ49MI3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CERKLQ49MI3 AC110285.6-201ENST00000617652 491 ntBASIC27.27■■□□□ 1.96
CERKLQ49MI3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms