Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SHROOM1Q2M3G4 MIR935-201ENST00000401179 91 ntBASIC27.4■■□□□ 1.98
SHROOM1Q2M3G4 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.4■■□□□ 1.98
SHROOM1Q2M3G4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC27.4■■□□□ 1.98
SHROOM1Q2M3G4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.4■■□□□ 1.98
SHROOM1Q2M3G4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SHROOM1Q2M3G4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.4■■□□□ 1.98
SHROOM1Q2M3G4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.4■■□□□ 1.98
SHROOM1Q2M3G4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SHROOM1Q2M3G4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SHROOM1Q2M3G4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.39■■□□□ 1.98
SHROOM1Q2M3G4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
SHROOM1Q2M3G4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.39■■□□□ 1.98
SHROOM1Q2M3G4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SHROOM1Q2M3G4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
SHROOM1Q2M3G4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
SHROOM1Q2M3G4 AC091060.1-201ENST00000623524 1766 ntBASIC27.38■■□□□ 1.97
SHROOM1Q2M3G4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SHROOM1Q2M3G4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.37■■□□□ 1.97
SHROOM1Q2M3G4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SHROOM1Q2M3G4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.37■■□□□ 1.97
SHROOM1Q2M3G4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SHROOM1Q2M3G4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SHROOM1Q2M3G4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.37■■□□□ 1.97
SHROOM1Q2M3G4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.37■■□□□ 1.97
SHROOM1Q2M3G4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.37■■□□□ 1.97
SHROOM1Q2M3G4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.37■■□□□ 1.97
SHROOM1Q2M3G4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SHROOM1Q2M3G4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
SHROOM1Q2M3G4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SHROOM1Q2M3G4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SHROOM1Q2M3G4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SHROOM1Q2M3G4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.36■■□□□ 1.97
SHROOM1Q2M3G4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SHROOM1Q2M3G4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SHROOM1Q2M3G4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.35■■□□□ 1.97
SHROOM1Q2M3G4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SHROOM1Q2M3G4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SHROOM1Q2M3G4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.35■■□□□ 1.97
SHROOM1Q2M3G4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.35■■□□□ 1.97
SHROOM1Q2M3G4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SHROOM1Q2M3G4 DUSP8P4-201ENST00000399538 1761 ntBASIC27.35■■□□□ 1.97
SHROOM1Q2M3G4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SHROOM1Q2M3G4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SHROOM1Q2M3G4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
SHROOM1Q2M3G4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.34■■□□□ 1.97
SHROOM1Q2M3G4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.34■■□□□ 1.97
SHROOM1Q2M3G4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
SHROOM1Q2M3G4 MIR6722-201ENST00000617286 78 ntBASIC27.34■■□□□ 1.97
SHROOM1Q2M3G4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.34■■□□□ 1.97
SHROOM1Q2M3G4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.34■■□□□ 1.97
SHROOM1Q2M3G4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SHROOM1Q2M3G4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SHROOM1Q2M3G4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SHROOM1Q2M3G4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.33■■□□□ 1.97
SHROOM1Q2M3G4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SHROOM1Q2M3G4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.33■■□□□ 1.97
SHROOM1Q2M3G4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SHROOM1Q2M3G4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.33■■□□□ 1.97
SHROOM1Q2M3G4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SHROOM1Q2M3G4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SHROOM1Q2M3G4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SHROOM1Q2M3G4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.32■■□□□ 1.96
SHROOM1Q2M3G4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SHROOM1Q2M3G4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.32■■□□□ 1.96
SHROOM1Q2M3G4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
SHROOM1Q2M3G4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.31■■□□□ 1.96
SHROOM1Q2M3G4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.31■■□□□ 1.96
SHROOM1Q2M3G4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.31■■□□□ 1.96
SHROOM1Q2M3G4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHROOM1Q2M3G4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SHROOM1Q2M3G4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SHROOM1Q2M3G4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SHROOM1Q2M3G4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SHROOM1Q2M3G4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.3■■□□□ 1.96
SHROOM1Q2M3G4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SHROOM1Q2M3G4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SHROOM1Q2M3G4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.29■■□□□ 1.96
SHROOM1Q2M3G4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.29■■□□□ 1.96
SHROOM1Q2M3G4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.29■■□□□ 1.96
SHROOM1Q2M3G4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.29■■□□□ 1.96
SHROOM1Q2M3G4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.29■■□□□ 1.96
SHROOM1Q2M3G4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SHROOM1Q2M3G4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SHROOM1Q2M3G4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
SHROOM1Q2M3G4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
SHROOM1Q2M3G4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SHROOM1Q2M3G4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
SHROOM1Q2M3G4 AC004448.1-201ENST00000458332 883 ntBASIC27.28■■□□□ 1.96
SHROOM1Q2M3G4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SHROOM1Q2M3G4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SHROOM1Q2M3G4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SHROOM1Q2M3G4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SHROOM1Q2M3G4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
SHROOM1Q2M3G4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.26■■□□□ 1.96
SHROOM1Q2M3G4 AC131274.2-201ENST00000580697 1507 ntBASIC27.26■■□□□ 1.96
SHROOM1Q2M3G4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
SHROOM1Q2M3G4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.26■■□□□ 1.95
SHROOM1Q2M3G4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.26■■□□□ 1.95
SHROOM1Q2M3G4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms