Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 PPP2R2A-218ENST00000522535 653 ntTSL 420.88■□□□□ 0.937e-7■■■■□ 22
SRSF1Q07955 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.257e-7■■■■□ 22
SRSF1Q07955 DAPK3-205ENST00000595279 2058 ntTSL 216.54■□□□□ 0.247e-7■■■■□ 22
SRSF1Q07955 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.197e-7■■■■□ 22
SRSF1Q07955 UBR4-210ENST00000466969 510 ntTSL 214.4□□□□□ -0.17e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-211ENST00000520329 836 ntTSL 513.98□□□□□ -0.177e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-206ENST00000518254 755 ntTSL 513.98□□□□□ -0.177e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-223ENST00000524169 784 ntTSL 313□□□□□ -0.337e-7■■■■□ 22
SRSF1Q07955 RBM33-204ENST00000392755 552 ntAPPRIS ALT2 TSL 412.26□□□□□ -0.457e-7■■■■□ 22
SRSF1Q07955 RBM33-206ENST00000392761 2934 ntTSL 210.74□□□□□ -0.697e-7■■■■□ 22
SRSF1Q07955 UBXN8-207ENST00000615729 702 ntTSL 1 (best) BASIC10.55□□□□□ -0.727e-7■■■■□ 22
SRSF1Q07955 UBXN8-209ENST00000620074 1058 ntTSL 5 BASIC10.3□□□□□ -0.767e-7■■■■□ 22
SRSF1Q07955 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC10.25□□□□□ -0.777e-7■■■■□ 22
SRSF1Q07955 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.777e-7■■■■□ 22
SRSF1Q07955 GPR107-207ENST00000493417 2833 ntTSL 1 (best)9.93□□□□□ -0.827e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-207ENST00000518397 830 ntTSL 59.72□□□□□ -0.857e-7■■■■□ 22
SRSF1Q07955 UBR4-216ENST00000494503 598 ntTSL 39.51□□□□□ -0.897e-7■■■■□ 22
SRSF1Q07955 UBXN8-205ENST00000522968 813 ntTSL 39.46□□□□□ -0.97e-7■■■■□ 22
SRSF1Q07955 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC9.11□□□□□ -0.957e-7■■■■□ 22
SRSF1Q07955 UBXN8-203ENST00000380154 1624 ntTSL 29.09□□□□□ -0.957e-7■■■■□ 22
SRSF1Q07955 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.987e-7■■■■□ 22
SRSF1Q07955 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC8.8□□□□□ -17e-7■■■■□ 22
SRSF1Q07955 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC7.77□□□□□ -1.177e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.297e-7■■■■□ 22
SRSF1Q07955 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.47e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-222ENST00000524099 569 ntTSL 46.1□□□□□ -1.437e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-220ENST00000523925 529 ntTSL 35.36□□□□□ -1.557e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-215ENST00000521557 601 ntTSL 45.36□□□□□ -1.557e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-219ENST00000523473 654 ntTSL 45.27□□□□□ -1.577e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-213ENST00000521095 579 ntTSL 35.04□□□□□ -1.67e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-209ENST00000519439 658 ntTSL 35.01□□□□□ -1.617e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-216ENST00000522150 573 ntTSL 54.87□□□□□ -1.637e-7■■■■□ 22
SRSF1Q07955 ZNF841-205ENST00000595599 458 ntTSL 24.54□□□□□ -1.687e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.737e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-214ENST00000521484 556 ntTSL 44□□□□□ -1.777e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-217ENST00000522482 576 ntTSL 43.38□□□□□ -1.877e-7■■■■□ 22
SRSF1Q07955 PPP2R2A-210ENST00000519636 575 ntTSL 53.09□□□□□ -1.917e-7■■■■□ 22
SRSF1Q07955 GOLGA2-206ENST00000468488 531 ntTSL 311.67□□□□□ -0.547e-10■■■■□ 22
SRSF1Q07955 TANGO2-221ENST00000476940 414 ntTSL 514.21□□□□□ -0.139e-10■■■■□ 22
SRSF1Q07955 STRIP1-209ENST00000540970 536 ntTSL 312.06□□□□□ -0.483e-6■■■■□ 21.9
SRSF1Q07955 STRIP1-201ENST00000369795 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -13e-6■■■■□ 21.9
SRSF1Q07955 STRIP1-205ENST00000485775 3363 ntTSL 1 (best)8.58□□□□□ -1.043e-6■■■■□ 21.9
SRSF1Q07955 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC7.85□□□□□ -1.153e-6■■■■□ 21.9
SRSF1Q07955 SGSM2-205ENST00000572875 460 ntTSL 322.69■■□□□ 1.222e-7■■■■□ 21.9
SRSF1Q07955 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.34■■□□□ 1.012e-7■■■■□ 21.9
SRSF1Q07955 IMPA2-211ENST00000590138 895 ntTSL 520.09■□□□□ 0.812e-7■■■■□ 21.9
SRSF1Q07955 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.712e-7■■■■□ 21.9
SRSF1Q07955 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.82■□□□□ 0.62e-7■■■■□ 21.9
SRSF1Q07955 IMPA2-210ENST00000590107 1616 ntTSL 518.63■□□□□ 0.572e-7■■■■□ 21.9
SRSF1Q07955 IMPA2-202ENST00000383376 1575 ntTSL 1 (best)18.31■□□□□ 0.522e-7■■■■□ 21.9
SRSF1Q07955 IMPA2-205ENST00000588752 651 ntTSL 318.21■□□□□ 0.512e-7■■■■□ 21.9
SRSF1Q07955 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.53□□□□□ -0.242e-7■■■■□ 21.9
SRSF1Q07955 SPG11-219ENST00000559822 561 ntTSL 511.8□□□□□ -0.522e-7■■■■□ 21.9
SRSF1Q07955 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.542e-7■■■■□ 21.9
SRSF1Q07955 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.692e-7■■■■□ 21.9
SRSF1Q07955 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.742e-7■■■■□ 21.9
SRSF1Q07955 SPG11-212ENST00000558790 858 ntTSL 310.13□□□□□ -0.792e-7■■■■□ 21.9
SRSF1Q07955 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.832e-7■■■■□ 21.9
SRSF1Q07955 SPG11-217ENST00000559511 2127 ntAPPRIS ALT2 TSL 28.63□□□□□ -1.032e-7■■■■□ 21.9
SRSF1Q07955 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC5.98□□□□□ -1.452e-7■■■■□ 21.9
SRSF1Q07955 OGT-203ENST00000444774 556 ntTSL 49.42□□□□□ -0.91e-23■■■■□ 21.9
SRSF1Q07955 ANKRD13D-212ENST00000512101 1491 ntTSL 524.39■■□□□ 1.55e-7■■■■□ 21.8
SRSF1Q07955 ANKRD13D-214ENST00000513460 558 ntTSL 221.72■■□□□ 1.075e-7■■■■□ 21.8
SRSF1Q07955 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.785e-7■■■■□ 21.8
SRSF1Q07955 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.62■□□□□ 0.735e-7■■■■□ 21.8
SRSF1Q07955 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.525e-7■■■■□ 21.8
SRSF1Q07955 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.17■□□□□ 0.345e-7■■■■□ 21.8
SRSF1Q07955 ILKAP-202ENST00000450411 1024 ntTSL 216.48■□□□□ 0.235e-7■■■■□ 21.8
SRSF1Q07955 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.18■□□□□ 0.185e-7■■■■□ 21.8
SRSF1Q07955 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.06■□□□□ 0.165e-7■■■■□ 21.8
SRSF1Q07955 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.37■□□□□ 0.055e-7■■■■□ 21.8
SRSF1Q07955 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.072e-10■■■■□ 21.8
SRSF1Q07955 ILKAP-204ENST00000463129 1861 ntTSL 214.23□□□□□ -0.135e-7■■■■□ 21.8
SRSF1Q07955 ANKRD13D-217ENST00000514779 642 ntTSL 212.35□□□□□ -0.435e-7■■■■□ 21.8
SRSF1Q07955 LANCL1-208ENST00000453956 590 ntTSL 411.75□□□□□ -0.535e-7■■■■□ 21.8
SRSF1Q07955 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.555e-7■■■■□ 21.8
SRSF1Q07955 LANCL1-206ENST00000448951 808 ntTSL 311.51□□□□□ -0.575e-7■■■■□ 21.8
SRSF1Q07955 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.715e-7■■■■□ 21.8
SRSF1Q07955 ILKAP-206ENST00000466468 2651 ntTSL 29.54□□□□□ -0.885e-7■■■■□ 21.8
SRSF1Q07955 MYO5C-205ENST00000558902 3074 ntTSL 29.53□□□□□ -0.885e-7■■■■□ 21.8
SRSF1Q07955 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.95e-7■■■■□ 21.8
SRSF1Q07955 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.925e-7■■■■□ 21.8
SRSF1Q07955 MYO5C-209ENST00000560809 6076 ntTSL 28.06□□□□□ -1.125e-7■■■■□ 21.8
SRSF1Q07955 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.275e-7■■■■□ 21.8
SRSF1Q07955 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.765e-7■■■■□ 21.8
SRSF1Q07955 CD46-211ENST00000464082 567 ntTSL 25.07□□□□□ -1.65e-6■■■■□ 21.8
SRSF1Q07955 STXBP2-205ENST00000593854 704 ntTSL 217.47■□□□□ 0.399e-13■■■■□ 21.7
SRSF1Q07955 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.293e-6■■■■□ 21.7
SRSF1Q07955 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.69■□□□□ 0.11e-6■■■■□ 21.7
SRSF1Q07955 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.08□□□□□ -0.488e-7■■■■□ 21.7
SRSF1Q07955 NUP85-220ENST00000583070 907 ntTSL 59.64□□□□□ -0.872e-7■■■■□ 21.7
SRSF1Q07955 PI4KA-205ENST00000466162 589 ntTSL 48.43□□□□□ -1.065e-6■■■■□ 21.7
SRSF1Q07955 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.07■□□□□ 0.641e-6■■■■□ 21.7
SRSF1Q07955 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.45■□□□□ 0.225e-9■■■■□ 21.7
SRSF1Q07955 AKAP8-202ENST00000537303 1350 ntTSL 215.73■□□□□ 0.114e-8■■■■□ 21.7
SRSF1Q07955 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.78□□□□□ -0.045e-9■■■■□ 21.7
SRSF1Q07955 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.65□□□□□ -0.065e-9■■■■□ 21.7
SRSF1Q07955 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.455e-9■■■■□ 21.7
SRSF1Q07955 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.495e-9■■■■□ 21.7
SRSF1Q07955 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.2□□□□□ -0.625e-9■■■■□ 21.7
Retrieved 100 of 14,836 protein–RNA pairs in 155.9 ms