Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 SIT4YDL047W 936 nt6.07□□□□□ -1.44
SSL2Q00578 RMD5YDR255C 1266 nt6.07□□□□□ -1.44
SSL2Q00578 YHR022CYHR022C 771 nt6.07□□□□□ -1.44
SSL2Q00578 YJL193WYJL193W 1209 nt6.07□□□□□ -1.44
SSL2Q00578 NEJ1YLR265C 1029 nt6.07□□□□□ -1.44
SSL2Q00578 RRP40YOL142W 723 nt6.07□□□□□ -1.44
SSL2Q00578 HEM15YOR176W 1182 nt6.07□□□□□ -1.44
SSL2Q00578 PUF3YLL013C 2640 nt6.07□□□□□ -1.44
SSL2Q00578 RPT1YKL145W 1404 nt6.07□□□□□ -1.44
SSL2Q00578 CRZ1YNL027W 2037 nt6.06□□□□□ -1.44
SSL2Q00578 SUB2YDL084W 1341 nt6.06□□□□□ -1.44
SSL2Q00578 CLB5YPR120C 1308 nt6.06□□□□□ -1.44
SSL2Q00578 SNF11YDR073W 510 nt6.06□□□□□ -1.44
SSL2Q00578 YDR541CYDR541C 1035 nt6.06□□□□□ -1.44
SSL2Q00578 ECM2YBR065C 1095 nt6.06□□□□□ -1.44
SSL2Q00578 ISA2YPR067W 558 nt6.06□□□□□ -1.44
SSL2Q00578 HER2YMR293C 1395 nt6.06□□□□□ -1.44
SSL2Q00578 MPC54YOR177C 1395 nt6.06□□□□□ -1.44
SSL2Q00578 YDL034WYDL034W 345 nt6.05□□□□□ -1.44
SSL2Q00578 MPS2YGL075C 1164 nt6.05□□□□□ -1.44
SSL2Q00578 MTW1YAL034W-A 870 nt6.05□□□□□ -1.44
SSL2Q00578 GEP5YLR091W 882 nt6.05□□□□□ -1.44
SSL2Q00578 snR10snR10 245 nt6.05□□□□□ -1.44
SSL2Q00578 KTR3YBR205W 1215 nt6.05□□□□□ -1.44
SSL2Q00578 FET3YMR058W 1911 nt6.05□□□□□ -1.44
SSL2Q00578 YHR045WYHR045W 1683 nt6.04□□□□□ -1.44
SSL2Q00578 BIT2YBR270C 1638 nt6.04□□□□□ -1.44
SSL2Q00578 TEL2YGR099W 2067 nt6.04□□□□□ -1.44
SSL2Q00578 SPO12YHR152W 522 nt6.04□□□□□ -1.44
SSL2Q00578 PAN6YIL145C 930 nt6.04□□□□□ -1.44
SSL2Q00578 MHO1YJR008W 1017 nt6.04□□□□□ -1.44
SSL2Q00578 DOM34YNL001W 1161 nt6.04□□□□□ -1.44
SSL2Q00578 DSC2YOL073C 969 nt6.04□□□□□ -1.44
SSL2Q00578 UBC4YBR082C 447 nt6.04□□□□□ -1.44
SSL2Q00578 CLB4YLR210W 1383 nt6.04□□□□□ -1.44
SSL2Q00578 QDR1YIL120W 1692 nt6.04□□□□□ -1.44
SSL2Q00578 VTA1YLR181C 993 nt6.03□□□□□ -1.44
SSL2Q00578 STE50YCL032W 1041 nt6.03□□□□□ -1.44
SSL2Q00578 YPL245WYPL245W 1365 nt6.03□□□□□ -1.44
SSL2Q00578 UBX2YML013W 1755 nt6.03□□□□□ -1.44
SSL2Q00578 PCS60YBR222C 1632 nt6.03□□□□□ -1.44
SSL2Q00578 SLT2YHR030C 1455 nt6.02□□□□□ -1.44
SSL2Q00578 PTR2YKR093W 1806 nt6.02□□□□□ -1.45
SSL2Q00578 HOS1YPR068C 1413 nt6.02□□□□□ -1.45
SSL2Q00578 MDH3YDL078C 1032 nt6.02□□□□□ -1.45
SSL2Q00578 VMA16YHR026W 642 nt6.02□□□□□ -1.45
SSL2Q00578 SNO4YMR322C 714 nt6.02□□□□□ -1.45
SSL2Q00578 YOL024WYOL024W 519 nt6.02□□□□□ -1.45
SSL2Q00578 HSP33YOR391C 714 nt6.02□□□□□ -1.45
SSL2Q00578 HSP32YPL280W 714 nt6.02□□□□□ -1.45
SSL2Q00578 HAL1YPR005C 885 nt6.02□□□□□ -1.45
SSL2Q00578 BRF1YGR246C 1791 nt6.02□□□□□ -1.45
SSL2Q00578 RTN1YDR233C 888 nt6.01□□□□□ -1.45
SSL2Q00578 YER187WYER187W 426 nt6.01□□□□□ -1.45
SSL2Q00578 SOH1YGL127C 384 nt6.01□□□□□ -1.45
SSL2Q00578 COS9YKL219W 1224 nt6.01□□□□□ -1.45
SSL2Q00578 YLR296WYLR296W 327 nt6.01□□□□□ -1.45
SSL2Q00578 YML101C-AYML101C-A 318 nt6.01□□□□□ -1.45
SSL2Q00578 ARR3YPR201W 1215 nt6.01□□□□□ -1.45
SSL2Q00578 EIS1YMR031C 2532 nt6.01□□□□□ -1.45
SSL2Q00578 PAF1YBR279W 1338 nt6□□□□□ -1.45
SSL2Q00578 QRI1YDL103C 1434 nt6□□□□□ -1.45
SSL2Q00578 YDL241WYDL241W 372 nt6□□□□□ -1.45
SSL2Q00578 YML131WYML131W 1098 nt6□□□□□ -1.45
SSL2Q00578 YOR024WYOR024W 324 nt6□□□□□ -1.45
SSL2Q00578 CPA1YOR303W 1236 nt6□□□□□ -1.45
SSL2Q00578 CWC27YPL064C 906 nt6□□□□□ -1.45
SSL2Q00578 YBR230W-AYBR230W-A 201 nt6□□□□□ -1.45
SSL2Q00578 DFG5YMR238W 1377 nt6□□□□□ -1.45
SSL2Q00578 PPR1YLR014C 2715 nt6□□□□□ -1.45
SSL2Q00578 RCK1YGL158W 1539 nt5.99□□□□□ -1.45
SSL2Q00578 CTS1YLR286C 1689 nt5.99□□□□□ -1.45
SSL2Q00578 SET5YHR207C 1581 nt5.99□□□□□ -1.45
SSL2Q00578 YIR043CYIR043C 693 nt5.99□□□□□ -1.45
SSL2Q00578 YKR041WYKR041W 753 nt5.99□□□□□ -1.45
SSL2Q00578 YKR104WYKR104W 921 nt5.99□□□□□ -1.45
SSL2Q00578 UBS1YBR165W 834 nt5.99□□□□□ -1.45
SSL2Q00578 MAL11YGR289C 1851 nt5.98□□□□□ -1.45
SSL2Q00578 ADK2YER170W 678 nt5.98□□□□□ -1.45
SSL2Q00578 SHP1YBL058W 1272 nt5.98□□□□□ -1.45
SSL2Q00578 YNL319WYNL319W 441 nt5.98□□□□□ -1.45
SSL2Q00578 LEM3YNL323W 1245 nt5.98□□□□□ -1.45
SSL2Q00578 RPL21BYPL079W 483 nt5.98□□□□□ -1.45
SSL2Q00578 YPR195CYPR195C 330 nt5.98□□□□□ -1.45
SSL2Q00578 PEX32YBR168W 1242 nt5.98□□□□□ -1.45
SSL2Q00578 FOB1YDR110W 1701 nt5.98□□□□□ -1.45
SSL2Q00578 ATE1YGL017W 1512 nt5.98□□□□□ -1.45
SSL2Q00578 VMA13YPR036W 1437 nt5.98□□□□□ -1.45
SSL2Q00578 FOL1YNL256W 2475 nt5.98□□□□□ -1.45
SSL2Q00578 RNR3YIL066C 2610 nt5.97□□□□□ -1.45
SSL2Q00578 RAM1YDL090C 1296 nt5.97□□□□□ -1.45
SSL2Q00578 PCL9YDL179W 915 nt5.97□□□□□ -1.45
SSL2Q00578 COX26YDR119W-A 201 nt5.97□□□□□ -1.45
SSL2Q00578 ROX3YBL093C 663 nt5.97□□□□□ -1.45
SSL2Q00578 GEP3YOR205C 1671 nt5.97□□□□□ -1.45
SSL2Q00578 ATG20YDL113C 1923 nt5.97□□□□□ -1.45
SSL2Q00578 NOP2YNL061W 1857 nt5.96□□□□□ -1.45
SSL2Q00578 ALT1YLR089C 1779 nt5.96□□□□□ -1.46
SSL2Q00578 SCM3YDL139C 672 nt5.96□□□□□ -1.46
SSL2Q00578 YPR1YDR368W 939 nt5.96□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms