Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX6-1P78426 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
NKX6-1P78426 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NKX6-1P78426 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX6-1P78426 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX6-1P78426 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NKX6-1P78426 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.34■□□□□ 0.85
NKX6-1P78426 AC131281.2-201ENST00000520478 145 ntBASIC20.34■□□□□ 0.85
NKX6-1P78426 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.34■□□□□ 0.85
NKX6-1P78426 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
NKX6-1P78426 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NKX6-1P78426 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX6-1P78426 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NKX6-1P78426 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NKX6-1P78426 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NKX6-1P78426 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NKX6-1P78426 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NKX6-1P78426 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.33■□□□□ 0.85
NKX6-1P78426 AL136116.3-201ENST00000402907 1138 ntBASIC20.33■□□□□ 0.85
NKX6-1P78426 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.33■□□□□ 0.84
NKX6-1P78426 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
NKX6-1P78426 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NKX6-1P78426 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.33■□□□□ 0.84
NKX6-1P78426 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX6-1P78426 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NKX6-1P78426 AC120024.1-201ENST00000562672 995 ntBASIC20.32■□□□□ 0.84
NKX6-1P78426 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.32■□□□□ 0.84
NKX6-1P78426 AC092028.1-203ENST00000608262 953 ntBASIC20.32■□□□□ 0.84
NKX6-1P78426 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX6-1P78426 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX6-1P78426 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NKX6-1P78426 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.31■□□□□ 0.84
NKX6-1P78426 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NKX6-1P78426 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX6-1P78426 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NKX6-1P78426 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NKX6-1P78426 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX6-1P78426 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX6-1P78426 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NKX6-1P78426 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX6-1P78426 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NKX6-1P78426 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NKX6-1P78426 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.3■□□□□ 0.84
NKX6-1P78426 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NKX6-1P78426 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX6-1P78426 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX6-1P78426 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NKX6-1P78426 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.29■□□□□ 0.84
NKX6-1P78426 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.29■□□□□ 0.84
NKX6-1P78426 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX6-1P78426 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NKX6-1P78426 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.28■□□□□ 0.84
NKX6-1P78426 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX6-1P78426 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX6-1P78426 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX6-1P78426 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NKX6-1P78426 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NKX6-1P78426 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.28■□□□□ 0.84
NKX6-1P78426 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.28■□□□□ 0.84
NKX6-1P78426 AC011551.1-201ENST00000614101 683 ntBASIC20.28■□□□□ 0.84
NKX6-1P78426 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX6-1P78426 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NKX6-1P78426 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NKX6-1P78426 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX6-1P78426 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX6-1P78426 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX6-1P78426 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NKX6-1P78426 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.27■□□□□ 0.84
NKX6-1P78426 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.27■□□□□ 0.84
NKX6-1P78426 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX6-1P78426 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NKX6-1P78426 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NKX6-1P78426 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NKX6-1P78426 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NKX6-1P78426 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX6-1P78426 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX6-1P78426 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
NKX6-1P78426 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX6-1P78426 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX6-1P78426 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
NKX6-1P78426 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX6-1P78426 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.25■□□□□ 0.83
NKX6-1P78426 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX6-1P78426 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX6-1P78426 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX6-1P78426 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX6-1P78426 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX6-1P78426 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.25■□□□□ 0.83
NKX6-1P78426 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NKX6-1P78426 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX6-1P78426 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
NKX6-1P78426 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
NKX6-1P78426 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NKX6-1P78426 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX6-1P78426 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.24■□□□□ 0.83
NKX6-1P78426 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.24■□□□□ 0.83
NKX6-1P78426 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NKX6-1P78426 AC010997.5-201ENST00000609182 354 ntBASIC20.24■□□□□ 0.83
NKX6-1P78426 AC005837.3-201ENST00000612163 286 ntBASIC20.24■□□□□ 0.83
NKX6-1P78426 AL117332.1-201ENST00000622628 974 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms