Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LMO4P61968 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LMO4P61968 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LMO4P61968 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO4P61968 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LMO4P61968 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.27■□□□□ 0.68
LMO4P61968 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LMO4P61968 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LMO4P61968 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.27■□□□□ 0.67
LMO4P61968 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.27■□□□□ 0.67
LMO4P61968 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO4P61968 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO4P61968 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMO4P61968 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.26■□□□□ 0.67
LMO4P61968 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.26■□□□□ 0.67
LMO4P61968 AC004448.1-201ENST00000458332 883 ntBASIC19.26■□□□□ 0.67
LMO4P61968 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.26■□□□□ 0.67
LMO4P61968 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.26■□□□□ 0.67
LMO4P61968 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.26■□□□□ 0.67
LMO4P61968 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.26■□□□□ 0.67
LMO4P61968 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.26■□□□□ 0.67
LMO4P61968 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO4P61968 AC145676.1-201ENST00000514988 2004 ntBASIC19.25■□□□□ 0.67
LMO4P61968 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.25■□□□□ 0.67
LMO4P61968 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.25■□□□□ 0.67
LMO4P61968 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
LMO4P61968 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMO4P61968 AL139246.5-201ENST00000606645 996 ntBASIC19.25■□□□□ 0.67
LMO4P61968 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LMO4P61968 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMO4P61968 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.24■□□□□ 0.67
LMO4P61968 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
LMO4P61968 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMO4P61968 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO4P61968 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO4P61968 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMO4P61968 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMO4P61968 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.24■□□□□ 0.67
LMO4P61968 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMO4P61968 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO4P61968 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
LMO4P61968 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMO4P61968 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.24■□□□□ 0.67
LMO4P61968 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.23■□□□□ 0.67
LMO4P61968 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO4P61968 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMO4P61968 MIR638-201ENST00000385237 100 ntBASIC19.23■□□□□ 0.67
LMO4P61968 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMO4P61968 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO4P61968 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMO4P61968 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
LMO4P61968 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMO4P61968 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
LMO4P61968 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.22■□□□□ 0.67
LMO4P61968 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMO4P61968 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
LMO4P61968 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMO4P61968 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.22■□□□□ 0.67
LMO4P61968 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.21■□□□□ 0.67
LMO4P61968 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO4P61968 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LMO4P61968 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.21■□□□□ 0.67
LMO4P61968 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMO4P61968 MIR6089-201ENST00000616698 64 ntBASIC19.21■□□□□ 0.67
LMO4P61968 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LMO4P61968 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.2■□□□□ 0.66
LMO4P61968 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.2■□□□□ 0.66
LMO4P61968 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LMO4P61968 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMO4P61968 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LMO4P61968 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LMO4P61968 AC110285.6-201ENST00000617652 491 ntBASIC19.2■□□□□ 0.66
LMO4P61968 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.2■□□□□ 0.66
LMO4P61968 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LMO4P61968 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO4P61968 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.19■□□□□ 0.66
LMO4P61968 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMO4P61968 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO4P61968 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMO4P61968 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO4P61968 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMO4P61968 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.19■□□□□ 0.66
LMO4P61968 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO4P61968 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LMO4P61968 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.18■□□□□ 0.66
LMO4P61968 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.18■□□□□ 0.66
LMO4P61968 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO4P61968 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMO4P61968 AC096631.2-201ENST00000436136 790 ntBASIC19.18■□□□□ 0.66
LMO4P61968 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.18■□□□□ 0.66
LMO4P61968 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LMO4P61968 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.18■□□□□ 0.66
LMO4P61968 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.18■□□□□ 0.66
LMO4P61968 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMO4P61968 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO4P61968 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO4P61968 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LMO4P61968 AC131274.2-201ENST00000580697 1507 ntBASIC19.16■□□□□ 0.66
LMO4P61968 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMO4P61968 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms