Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHMP4BP1P59074 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHMP4BP1P59074 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHMP4BP1P59074 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.39■■□□□ 1.82
CHMP4BP1P59074 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.39■■□□□ 1.82
CHMP4BP1P59074 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHMP4BP1P59074 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
CHMP4BP1P59074 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.39■■□□□ 1.81
CHMP4BP1P59074 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CHMP4BP1P59074 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.81
CHMP4BP1P59074 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHMP4BP1P59074 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CHMP4BP1P59074 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHMP4BP1P59074 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CHMP4BP1P59074 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.38■■□□□ 1.81
CHMP4BP1P59074 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.38■■□□□ 1.81
CHMP4BP1P59074 AC131281.2-201ENST00000520478 145 ntBASIC26.38■■□□□ 1.81
CHMP4BP1P59074 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHMP4BP1P59074 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHMP4BP1P59074 AL136116.3-201ENST00000402907 1138 ntBASIC26.37■■□□□ 1.81
CHMP4BP1P59074 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
CHMP4BP1P59074 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
CHMP4BP1P59074 AC011551.1-201ENST00000614101 683 ntBASIC26.37■■□□□ 1.81
CHMP4BP1P59074 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.37■■□□□ 1.81
CHMP4BP1P59074 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHMP4BP1P59074 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHMP4BP1P59074 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.36■■□□□ 1.81
CHMP4BP1P59074 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHMP4BP1P59074 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.36■■□□□ 1.81
CHMP4BP1P59074 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.36■■□□□ 1.81
CHMP4BP1P59074 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CHMP4BP1P59074 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHMP4BP1P59074 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHMP4BP1P59074 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BP1P59074 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BP1P59074 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.35■■□□□ 1.81
CHMP4BP1P59074 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.35■■□□□ 1.81
CHMP4BP1P59074 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BP1P59074 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.35■■□□□ 1.81
CHMP4BP1P59074 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.35■■□□□ 1.81
CHMP4BP1P59074 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.35■■□□□ 1.81
CHMP4BP1P59074 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.35■■□□□ 1.81
CHMP4BP1P59074 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BP1P59074 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
CHMP4BP1P59074 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
CHMP4BP1P59074 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.34■■□□□ 1.81
CHMP4BP1P59074 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.34■■□□□ 1.81
CHMP4BP1P59074 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.34■■□□□ 1.81
CHMP4BP1P59074 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.34■■□□□ 1.81
CHMP4BP1P59074 AL117332.1-201ENST00000622628 974 ntBASIC26.34■■□□□ 1.81
CHMP4BP1P59074 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHMP4BP1P59074 FOXO3B-201ENST00000395675 1928 ntBASIC26.33■■□□□ 1.81
CHMP4BP1P59074 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BP1P59074 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.33■■□□□ 1.81
CHMP4BP1P59074 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.33■■□□□ 1.81
CHMP4BP1P59074 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BP1P59074 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BP1P59074 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.33■■□□□ 1.81
CHMP4BP1P59074 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP4BP1P59074 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.33■■□□□ 1.81
CHMP4BP1P59074 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.33■■□□□ 1.81
CHMP4BP1P59074 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.33■■□□□ 1.81
CHMP4BP1P59074 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.32■■□□□ 1.8
CHMP4BP1P59074 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BP1P59074 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BP1P59074 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.32■■□□□ 1.8
CHMP4BP1P59074 MIR6724-1-201ENST00000616420 92 ntBASIC26.32■■□□□ 1.8
CHMP4BP1P59074 MIR6724-2-201ENST00000616483 92 ntBASIC26.32■■□□□ 1.8
CHMP4BP1P59074 MIR6724-4-201ENST00000617390 92 ntBASIC26.32■■□□□ 1.8
CHMP4BP1P59074 MIR6724-3-201ENST00000622482 92 ntBASIC26.32■■□□□ 1.8
CHMP4BP1P59074 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CHMP4BP1P59074 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BP1P59074 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BP1P59074 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP4BP1P59074 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BP1P59074 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.31■■□□□ 1.8
CHMP4BP1P59074 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BP1P59074 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CHMP4BP1P59074 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CHMP4BP1P59074 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.31■■□□□ 1.8
CHMP4BP1P59074 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.31■■□□□ 1.8
CHMP4BP1P59074 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BP1P59074 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.31■■□□□ 1.8
CHMP4BP1P59074 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP4BP1P59074 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BP1P59074 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.3■■□□□ 1.8
CHMP4BP1P59074 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BP1P59074 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BP1P59074 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.3■■□□□ 1.8
CHMP4BP1P59074 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BP1P59074 ERN1-208ENST00000606895 2068 ntBASIC26.3■■□□□ 1.8
CHMP4BP1P59074 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.3■■□□□ 1.8
CHMP4BP1P59074 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BP1P59074 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP4BP1P59074 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHMP4BP1P59074 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHMP4BP1P59074 AL356740.2-201ENST00000601559 647 ntBASIC26.29■■□□□ 1.8
CHMP4BP1P59074 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.29■■□□□ 1.8
CHMP4BP1P59074 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP4BP1P59074 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms