Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGA2P52926 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA2P52926 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA2P52926 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA2P52926 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.28■■□□□ 1
HMGA2P52926 AC007029.1-201ENST00000604183 313 ntBASIC21.28■■□□□ 1
HMGA2P52926 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGA2P52926 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
HMGA2P52926 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGA2P52926 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMGA2P52926 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGA2P52926 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.27■■□□□ 1
HMGA2P52926 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HMGA2P52926 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.27■■□□□ 1
HMGA2P52926 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
HMGA2P52926 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.27■■□□□ 1
HMGA2P52926 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGA2P52926 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HMGA2P52926 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HMGA2P52926 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.27■□□□□ 0.99
HMGA2P52926 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.27■□□□□ 0.99
HMGA2P52926 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HMGA2P52926 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA2P52926 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA2P52926 C9orf163-202ENST00000624034 2573 ntBASIC21.26■□□□□ 0.99
HMGA2P52926 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA2P52926 AC026202.3-201ENST00000600805 1127 ntBASIC21.26■□□□□ 0.99
HMGA2P52926 AC022413.1-201ENST00000624602 984 ntBASIC21.26■□□□□ 0.99
HMGA2P52926 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA2P52926 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGA2P52926 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGA2P52926 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.25■□□□□ 0.99
HMGA2P52926 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGA2P52926 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGA2P52926 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGA2P52926 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HMGA2P52926 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGA2P52926 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGA2P52926 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.25■□□□□ 0.99
HMGA2P52926 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGA2P52926 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGA2P52926 MIR639-201ENST00000384974 98 ntBASIC21.24■□□□□ 0.99
HMGA2P52926 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HMGA2P52926 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGA2P52926 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGA2P52926 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGA2P52926 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
HMGA2P52926 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGA2P52926 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.23■□□□□ 0.99
HMGA2P52926 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.23■□□□□ 0.99
HMGA2P52926 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGA2P52926 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
HMGA2P52926 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGA2P52926 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HMGA2P52926 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGA2P52926 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HMGA2P52926 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HMGA2P52926 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGA2P52926 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGA2P52926 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGA2P52926 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGA2P52926 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HMGA2P52926 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGA2P52926 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.22■□□□□ 0.99
HMGA2P52926 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
HMGA2P52926 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGA2P52926 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGA2P52926 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGA2P52926 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGA2P52926 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGA2P52926 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.21■□□□□ 0.99
HMGA2P52926 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGA2P52926 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.21■□□□□ 0.99
HMGA2P52926 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGA2P52926 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.21■□□□□ 0.99
HMGA2P52926 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGA2P52926 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGA2P52926 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HMGA2P52926 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HMGA2P52926 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGA2P52926 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGA2P52926 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HMGA2P52926 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGA2P52926 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGA2P52926 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HMGA2P52926 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HMGA2P52926 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGA2P52926 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGA2P52926 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGA2P52926 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGA2P52926 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HMGA2P52926 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGA2P52926 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGA2P52926 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGA2P52926 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGA2P52926 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.18■□□□□ 0.98
HMGA2P52926 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.18■□□□□ 0.98
HMGA2P52926 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.18■□□□□ 0.98
HMGA2P52926 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGA2P52926 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms