Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRP9P49458 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRP9P49458 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRP9P49458 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRP9P49458 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SRP9P49458 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SRP9P49458 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRP9P49458 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.45■□□□□ 0.86
SRP9P49458 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.45■□□□□ 0.86
SRP9P49458 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRP9P49458 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRP9P49458 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.45■□□□□ 0.86
SRP9P49458 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.45■□□□□ 0.86
SRP9P49458 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.45■□□□□ 0.86
SRP9P49458 C9orf163-202ENST00000624034 2573 ntBASIC20.45■□□□□ 0.86
SRP9P49458 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.45■□□□□ 0.86
SRP9P49458 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.44■□□□□ 0.86
SRP9P49458 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP9P49458 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP9P49458 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SRP9P49458 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SRP9P49458 KRT18P10-201ENST00000388836 1287 ntBASIC20.44■□□□□ 0.86
SRP9P49458 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP9P49458 AC018755.3-202ENST00000596210 929 ntBASIC20.44■□□□□ 0.86
SRP9P49458 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SRP9P49458 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP9P49458 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRP9P49458 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRP9P49458 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRP9P49458 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRP9P49458 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SRP9P49458 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SRP9P49458 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRP9P49458 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRP9P49458 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRP9P49458 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRP9P49458 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP9P49458 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.42■□□□□ 0.86
SRP9P49458 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRP9P49458 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP9P49458 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP9P49458 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SRP9P49458 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SRP9P49458 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP9P49458 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRP9P49458 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRP9P49458 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRP9P49458 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRP9P49458 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRP9P49458 AC129492.7-201ENST00000622992 756 ntBASIC20.41■□□□□ 0.86
SRP9P49458 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.41■□□□□ 0.86
SRP9P49458 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SRP9P49458 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRP9P49458 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SRP9P49458 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SRP9P49458 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
SRP9P49458 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SRP9P49458 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRP9P49458 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.4■□□□□ 0.86
SRP9P49458 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRP9P49458 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRP9P49458 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRP9P49458 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SRP9P49458 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SRP9P49458 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SRP9P49458 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SRP9P49458 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
SRP9P49458 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SRP9P49458 MIR6765-201ENST00000614092 87 ntBASIC20.39■□□□□ 0.85
SRP9P49458 AC012354.3-201ENST00000623734 483 ntBASIC20.39■□□□□ 0.85
SRP9P49458 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRP9P49458 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.39■□□□□ 0.85
SRP9P49458 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRP9P49458 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRP9P49458 DUX4L9-201ENST00000449051 1259 ntBASIC20.38■□□□□ 0.85
SRP9P49458 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SRP9P49458 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SRP9P49458 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRP9P49458 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRP9P49458 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRP9P49458 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRP9P49458 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.38■□□□□ 0.85
SRP9P49458 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRP9P49458 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRP9P49458 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SRP9P49458 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRP9P49458 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRP9P49458 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRP9P49458 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRP9P49458 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.37■□□□□ 0.85
SRP9P49458 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.37■□□□□ 0.85
SRP9P49458 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRP9P49458 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRP9P49458 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SRP9P49458 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRP9P49458 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRP9P49458 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.36■□□□□ 0.85
SRP9P49458 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.36■□□□□ 0.85
SRP9P49458 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRP9P49458 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms