Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.89■□□□□ 0.61
CEACAM3P40198 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CEACAM3P40198 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CEACAM3P40198 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CEACAM3P40198 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CEACAM3P40198 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CEACAM3P40198 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CEACAM3P40198 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CEACAM3P40198 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CEACAM3P40198 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CEACAM3P40198 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.88■□□□□ 0.61
CEACAM3P40198 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.88■□□□□ 0.61
CEACAM3P40198 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CEACAM3P40198 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CEACAM3P40198 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.88■□□□□ 0.61
CEACAM3P40198 MIR4281-201ENST00000580852 62 ntBASIC18.87■□□□□ 0.61
CEACAM3P40198 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.87■□□□□ 0.61
CEACAM3P40198 AC138932.3-201ENST00000567634 1902 ntBASIC18.86■□□□□ 0.61
CEACAM3P40198 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM3P40198 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM3P40198 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM3P40198 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM3P40198 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CEACAM3P40198 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CEACAM3P40198 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM3P40198 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CEACAM3P40198 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM3P40198 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM3P40198 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM3P40198 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CEACAM3P40198 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CEACAM3P40198 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM3P40198 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM3P40198 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CEACAM3P40198 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM3P40198 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM3P40198 BX664725.1-201ENST00000438252 379 ntBASIC18.84■□□□□ 0.61
CEACAM3P40198 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
CEACAM3P40198 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.84■□□□□ 0.61
CEACAM3P40198 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM3P40198 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CEACAM3P40198 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.83■□□□□ 0.61
CEACAM3P40198 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CEACAM3P40198 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CEACAM3P40198 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CEACAM3P40198 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CEACAM3P40198 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.83■□□□□ 0.6
CEACAM3P40198 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CEACAM3P40198 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEACAM3P40198 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEACAM3P40198 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CEACAM3P40198 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CEACAM3P40198 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.82■□□□□ 0.6
CEACAM3P40198 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.82■□□□□ 0.6
CEACAM3P40198 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEACAM3P40198 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEACAM3P40198 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CEACAM3P40198 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.81■□□□□ 0.6
CEACAM3P40198 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CEACAM3P40198 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.81■□□□□ 0.6
CEACAM3P40198 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CEACAM3P40198 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CEACAM3P40198 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CEACAM3P40198 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.8■□□□□ 0.6
CEACAM3P40198 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CEACAM3P40198 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CEACAM3P40198 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.8■□□□□ 0.6
CEACAM3P40198 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.8■□□□□ 0.6
CEACAM3P40198 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.8■□□□□ 0.6
CEACAM3P40198 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CEACAM3P40198 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.8■□□□□ 0.6
CEACAM3P40198 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CEACAM3P40198 AC137630.3-201ENST00000607245 391 ntBASIC18.8■□□□□ 0.6
CEACAM3P40198 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.8■□□□□ 0.6
CEACAM3P40198 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CEACAM3P40198 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CEACAM3P40198 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CEACAM3P40198 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CEACAM3P40198 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CEACAM3P40198 KRT125P-201ENST00000546827 989 ntBASIC18.79■□□□□ 0.6
CEACAM3P40198 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CEACAM3P40198 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.79■□□□□ 0.6
CEACAM3P40198 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.79■□□□□ 0.6
CEACAM3P40198 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CEACAM3P40198 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CEACAM3P40198 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CEACAM3P40198 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CEACAM3P40198 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CEACAM3P40198 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CEACAM3P40198 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.78■□□□□ 0.6
CEACAM3P40198 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CEACAM3P40198 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.78■□□□□ 0.6
CEACAM3P40198 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CEACAM3P40198 Z92544.1-202ENST00000571933 1220 ntBASIC18.78■□□□□ 0.6
CEACAM3P40198 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.78■□□□□ 0.6
CEACAM3P40198 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CEACAM3P40198 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CEACAM3P40198 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CEACAM3P40198 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CEACAM3P40198 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms