Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLCN1P35523 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLCN1P35523 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.32■■□□□ 1.8
CLCN1P35523 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.32■■□□□ 1.8
CLCN1P35523 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CLCN1P35523 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.32■■□□□ 1.8
CLCN1P35523 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLCN1P35523 AL359258.2-201ENST00000564063 1566 ntBASIC26.32■■□□□ 1.8
CLCN1P35523 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.32■■□□□ 1.8
CLCN1P35523 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CLCN1P35523 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CLCN1P35523 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.31■■□□□ 1.8
CLCN1P35523 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLCN1P35523 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
CLCN1P35523 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.31■■□□□ 1.8
CLCN1P35523 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CLCN1P35523 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLCN1P35523 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLCN1P35523 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLCN1P35523 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC26.3■■□□□ 1.8
CLCN1P35523 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CLCN1P35523 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLCN1P35523 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CLCN1P35523 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CLCN1P35523 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLCN1P35523 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLCN1P35523 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.29■■□□□ 1.8
CLCN1P35523 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLCN1P35523 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLCN1P35523 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CLCN1P35523 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLCN1P35523 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLCN1P35523 AC004812.2-201ENST00000611079 2094 ntBASIC26.28■■□□□ 1.8
CLCN1P35523 MIR639-201ENST00000384974 98 ntBASIC26.28■■□□□ 1.8
CLCN1P35523 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.28■■□□□ 1.8
CLCN1P35523 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC26.28■■□□□ 1.8
CLCN1P35523 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLCN1P35523 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLCN1P35523 LINC00526-201ENST00000581067 1875 ntBASIC26.28■■□□□ 1.8
CLCN1P35523 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.27■■□□□ 1.8
CLCN1P35523 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLCN1P35523 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CLCN1P35523 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLCN1P35523 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CLCN1P35523 AC127496.7-201ENST00000625110 1798 ntBASIC26.27■■□□□ 1.8
CLCN1P35523 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CLCN1P35523 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
CLCN1P35523 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLCN1P35523 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLCN1P35523 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CLCN1P35523 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CLCN1P35523 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLCN1P35523 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.26■■□□□ 1.79
CLCN1P35523 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLCN1P35523 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLCN1P35523 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLCN1P35523 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CLCN1P35523 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CLCN1P35523 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLCN1P35523 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.24■■□□□ 1.79
CLCN1P35523 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.24■■□□□ 1.79
CLCN1P35523 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC26.24■■□□□ 1.79
CLCN1P35523 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLCN1P35523 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CLCN1P35523 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.23■■□□□ 1.79
CLCN1P35523 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CLCN1P35523 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC26.23■■□□□ 1.79
CLCN1P35523 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CLCN1P35523 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CLCN1P35523 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLCN1P35523 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLCN1P35523 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLCN1P35523 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLCN1P35523 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CLCN1P35523 AL359504.2-201ENST00000605506 1601 ntBASIC26.21■■□□□ 1.79
CLCN1P35523 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLCN1P35523 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLCN1P35523 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLCN1P35523 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.21■■□□□ 1.79
CLCN1P35523 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.79
CLCN1P35523 DUSP8P3-201ENST00000399571 1760 ntBASIC26.2■■□□□ 1.79
CLCN1P35523 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLCN1P35523 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.2■■□□□ 1.78
CLCN1P35523 AL137060.1-201ENST00000618151 2648 ntBASIC26.2■■□□□ 1.78
CLCN1P35523 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
CLCN1P35523 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CLCN1P35523 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.19■■□□□ 1.78
CLCN1P35523 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms