Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.79■□□□□ 0.76
TNFSF4P23510 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TNFSF4P23510 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF4P23510 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF4P23510 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF4P23510 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFSF4P23510 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF4P23510 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF4P23510 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF4P23510 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF4P23510 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF4P23510 AC142381.3-201ENST00000568208 1670 ntBASIC19.78■□□□□ 0.76
TNFSF4P23510 AP003733.4-201ENST00000623785 1697 ntBASIC19.78■□□□□ 0.76
TNFSF4P23510 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF4P23510 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF4P23510 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.77■□□□□ 0.76
TNFSF4P23510 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF4P23510 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF4P23510 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF4P23510 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.77■□□□□ 0.76
TNFSF4P23510 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF4P23510 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF4P23510 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TNFSF4P23510 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.77■□□□□ 0.76
TNFSF4P23510 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.77■□□□□ 0.76
TNFSF4P23510 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.77■□□□□ 0.76
TNFSF4P23510 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF4P23510 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF4P23510 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF4P23510 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF4P23510 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF4P23510 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.76■□□□□ 0.75
TNFSF4P23510 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF4P23510 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF4P23510 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF4P23510 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF4P23510 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF4P23510 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF4P23510 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.76■□□□□ 0.75
TNFSF4P23510 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF4P23510 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF4P23510 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF4P23510 AC239859.2-201ENST00000444165 318 ntBASIC19.75■□□□□ 0.75
TNFSF4P23510 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF4P23510 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.75■□□□□ 0.75
TNFSF4P23510 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.75■□□□□ 0.75
TNFSF4P23510 AC020928.2-201ENST00000588717 2197 ntBASIC19.75■□□□□ 0.75
TNFSF4P23510 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF4P23510 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFSF4P23510 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF4P23510 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.74■□□□□ 0.75
TNFSF4P23510 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.74■□□□□ 0.75
TNFSF4P23510 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF4P23510 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF4P23510 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TNFSF4P23510 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF4P23510 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFSF4P23510 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF4P23510 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFSF4P23510 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TNFSF4P23510 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.73■□□□□ 0.75
TNFSF4P23510 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TNFSF4P23510 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFSF4P23510 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.73■□□□□ 0.75
TNFSF4P23510 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFSF4P23510 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF4P23510 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFSF4P23510 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF4P23510 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF4P23510 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TNFSF4P23510 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF4P23510 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF4P23510 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF4P23510 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
TNFSF4P23510 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF4P23510 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF4P23510 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF4P23510 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF4P23510 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF4P23510 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.72■□□□□ 0.75
TNFSF4P23510 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF4P23510 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF4P23510 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF4P23510 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF4P23510 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF4P23510 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF4P23510 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFSF4P23510 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TNFSF4P23510 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF4P23510 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFSF4P23510 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TNFSF4P23510 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF4P23510 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF4P23510 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFSF4P23510 MIR4787-201ENST00000607364 84 ntBASIC19.71■□□□□ 0.75
TNFSF4P23510 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFSF4P23510 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF4P23510 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF4P23510 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TNFSF4P23510 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms