Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.06■□□□□ 0.8
CCL1P22362 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL1P22362 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL1P22362 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL1P22362 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL1P22362 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCL1P22362 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.05■□□□□ 0.8
CCL1P22362 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL1P22362 DUX4L9-201ENST00000449051 1259 ntBASIC20.05■□□□□ 0.8
CCL1P22362 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.05■□□□□ 0.8
CCL1P22362 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCL1P22362 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.05■□□□□ 0.8
CCL1P22362 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCL1P22362 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCL1P22362 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.05■□□□□ 0.8
CCL1P22362 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL1P22362 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL1P22362 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.04■□□□□ 0.8
CCL1P22362 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL1P22362 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.04■□□□□ 0.8
CCL1P22362 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL1P22362 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL1P22362 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.04■□□□□ 0.8
CCL1P22362 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.04■□□□□ 0.8
CCL1P22362 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL1P22362 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL1P22362 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL1P22362 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL1P22362 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCL1P22362 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCL1P22362 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL1P22362 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL1P22362 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCL1P22362 DUSP8P5-201ENST00000422884 1815 ntBASIC20.03■□□□□ 0.8
CCL1P22362 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCL1P22362 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL1P22362 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CCL1P22362 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCL1P22362 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL1P22362 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL1P22362 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL1P22362 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.03■□□□□ 0.8
CCL1P22362 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL1P22362 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL1P22362 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL1P22362 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL1P22362 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.02■□□□□ 0.8
CCL1P22362 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.02■□□□□ 0.79
CCL1P22362 AL161729.1-201ENST00000604104 1402 ntBASIC20.02■□□□□ 0.79
CCL1P22362 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
CCL1P22362 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.01■□□□□ 0.79
CCL1P22362 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
CCL1P22362 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCL1P22362 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.01■□□□□ 0.79
CCL1P22362 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCL1P22362 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCL1P22362 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCL1P22362 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20■□□□□ 0.79
CCL1P22362 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CCL1P22362 LONRF2P2-201ENST00000439212 571 ntBASIC20■□□□□ 0.79
CCL1P22362 HSD17B1P1-201ENST00000590052 955 ntBASIC20■□□□□ 0.79
CCL1P22362 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
CCL1P22362 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CCL1P22362 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCL1P22362 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCL1P22362 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCL1P22362 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCL1P22362 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL1P22362 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.99■□□□□ 0.79
CCL1P22362 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL1P22362 U85056.1-201ENST00000616429 682 ntBASIC19.99■□□□□ 0.79
CCL1P22362 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL1P22362 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCL1P22362 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCL1P22362 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.99■□□□□ 0.79
CCL1P22362 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCL1P22362 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.99■□□□□ 0.79
CCL1P22362 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.99■□□□□ 0.79
CCL1P22362 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CCL1P22362 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL1P22362 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCL1P22362 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.98■□□□□ 0.79
CCL1P22362 AC129492.7-201ENST00000622992 756 ntBASIC19.98■□□□□ 0.79
CCL1P22362 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL1P22362 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.98■□□□□ 0.79
CCL1P22362 AC012676.1-201ENST00000574705 1949 ntBASIC19.98■□□□□ 0.79
CCL1P22362 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL1P22362 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL1P22362 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL1P22362 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCL1P22362 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCL1P22362 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.97■□□□□ 0.79
CCL1P22362 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL1P22362 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCL1P22362 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
CCL1P22362 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL1P22362 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL1P22362 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL1P22362 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL1P22362 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms