Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.25■□□□□ 0.99
P04436 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
P04436 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.25■□□□□ 0.99
P04436 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.25■□□□□ 0.99
P04436 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.25■□□□□ 0.99
P04436 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.25■□□□□ 0.99
P04436 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
P04436 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.25■□□□□ 0.99
P04436 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P04436 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P04436 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P04436 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
P04436 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.24■□□□□ 0.99
P04436 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
P04436 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
P04436 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.23■□□□□ 0.99
P04436 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.23■□□□□ 0.99
P04436 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
P04436 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P04436 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P04436 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P04436 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P04436 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
P04436 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P04436 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.22■□□□□ 0.99
P04436 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.22■□□□□ 0.99
P04436 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
P04436 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
P04436 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.21■□□□□ 0.99
P04436 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
P04436 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
P04436 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
P04436 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P04436 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P04436 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.2■□□□□ 0.98
P04436 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.2■□□□□ 0.98
P04436 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.2■□□□□ 0.98
P04436 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
P04436 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P04436 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.2■□□□□ 0.98
P04436 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P04436 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
P04436 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.19■□□□□ 0.98
P04436 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
P04436 SNX5-217ENST00000606557 1087 ntBASIC21.19■□□□□ 0.98
P04436 MIR6724-1-201ENST00000616420 92 ntBASIC21.19■□□□□ 0.98
P04436 MIR6724-2-201ENST00000616483 92 ntBASIC21.19■□□□□ 0.98
P04436 MIR6724-4-201ENST00000617390 92 ntBASIC21.19■□□□□ 0.98
P04436 MIR6724-3-201ENST00000622482 92 ntBASIC21.19■□□□□ 0.98
P04436 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P04436 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
P04436 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
P04436 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
P04436 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P04436 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
P04436 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
P04436 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.18■□□□□ 0.98
P04436 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P04436 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.17■□□□□ 0.98
P04436 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P04436 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.17■□□□□ 0.98
P04436 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
P04436 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P04436 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.17■□□□□ 0.98
P04436 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P04436 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P04436 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P04436 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
P04436 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.16■□□□□ 0.98
P04436 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P04436 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.16■□□□□ 0.98
P04436 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P04436 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P04436 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P04436 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P04436 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P04436 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.16■□□□□ 0.98
P04436 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.15■□□□□ 0.98
P04436 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
P04436 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
P04436 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.15■□□□□ 0.98
P04436 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.15■□□□□ 0.98
P04436 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.15■□□□□ 0.98
P04436 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.15■□□□□ 0.98
P04436 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.15■□□□□ 0.98
P04436 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
P04436 MIR6722-201ENST00000617286 78 ntBASIC21.15■□□□□ 0.98
P04436 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.15■□□□□ 0.98
P04436 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
P04436 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
P04436 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.15■□□□□ 0.98
P04436 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
P04436 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
P04436 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
P04436 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
P04436 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
P04436 AC004448.1-201ENST00000458332 883 ntBASIC21.14■□□□□ 0.97
P04436 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.14■□□□□ 0.97
P04436 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
P04436 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms