Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CD74P04233 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD74P04233 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CD74P04233 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CD74P04233 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CD74P04233 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD74P04233 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CD74P04233 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.53■□□□□ 0.72
CD74P04233 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD74P04233 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD74P04233 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD74P04233 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.52■□□□□ 0.72
CD74P04233 LINC00565-201ENST00000562710 2331 ntBASIC19.52■□□□□ 0.72
CD74P04233 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD74P04233 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.52■□□□□ 0.72
CD74P04233 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.52■□□□□ 0.72
CD74P04233 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD74P04233 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CD74P04233 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CD74P04233 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD74P04233 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.52■□□□□ 0.71
CD74P04233 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD74P04233 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.51■□□□□ 0.71
CD74P04233 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD74P04233 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD74P04233 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD74P04233 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.51■□□□□ 0.71
CD74P04233 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD74P04233 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.51■□□□□ 0.71
CD74P04233 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD74P04233 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD74P04233 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.51■□□□□ 0.71
CD74P04233 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CD74P04233 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD74P04233 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD74P04233 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD74P04233 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CD74P04233 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.5■□□□□ 0.71
CD74P04233 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.5■□□□□ 0.71
CD74P04233 DUX4L11-201ENST00000611504 1267 ntBASIC19.5■□□□□ 0.71
CD74P04233 DUX4L12-201ENST00000614593 1267 ntBASIC19.5■□□□□ 0.71
CD74P04233 DUX4L14-201ENST00000621227 1267 ntBASIC19.5■□□□□ 0.71
CD74P04233 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CD74P04233 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD74P04233 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CD74P04233 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CD74P04233 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CD74P04233 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD74P04233 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD74P04233 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CD74P04233 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD74P04233 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD74P04233 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD74P04233 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD74P04233 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD74P04233 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD74P04233 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD74P04233 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CD74P04233 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD74P04233 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CD74P04233 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD74P04233 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD74P04233 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD74P04233 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD74P04233 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD74P04233 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CD74P04233 ANOS2P-203ENST00000472227 1816 ntBASIC19.48■□□□□ 0.71
CD74P04233 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD74P04233 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD74P04233 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.47■□□□□ 0.71
CD74P04233 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD74P04233 DUSP8P3-201ENST00000399571 1760 ntBASIC19.47■□□□□ 0.71
CD74P04233 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD74P04233 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD74P04233 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CD74P04233 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.47■□□□□ 0.71
CD74P04233 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD74P04233 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD74P04233 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD74P04233 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD74P04233 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD74P04233 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD74P04233 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD74P04233 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD74P04233 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD74P04233 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD74P04233 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD74P04233 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD74P04233 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD74P04233 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD74P04233 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CD74P04233 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD74P04233 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD74P04233 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD74P04233 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.45■□□□□ 0.7
CD74P04233 AC025884.2-201ENST00000553429 711 ntBASIC19.45■□□□□ 0.7
CD74P04233 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CD74P04233 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD74P04233 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD74P04233 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms