Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.22■□□□□ 0.83
LCATP04180 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.22■□□□□ 0.83
LCATP04180 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCATP04180 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCATP04180 AC141586.4-201ENST00000624558 1573 ntBASIC20.21■□□□□ 0.83
LCATP04180 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LCATP04180 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LCATP04180 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCATP04180 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCATP04180 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LCATP04180 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCATP04180 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCATP04180 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCATP04180 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCATP04180 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LCATP04180 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LCATP04180 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.2■□□□□ 0.82
LCATP04180 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.2■□□□□ 0.82
LCATP04180 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCATP04180 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LCATP04180 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.2■□□□□ 0.82
LCATP04180 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCATP04180 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCATP04180 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCATP04180 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LCATP04180 AC019171.1-201ENST00000601251 1056 ntBASIC20.19■□□□□ 0.82
LCATP04180 AC074183.2-201ENST00000623112 922 ntBASIC20.19■□□□□ 0.82
LCATP04180 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LCATP04180 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCATP04180 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.19■□□□□ 0.82
LCATP04180 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCATP04180 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCATP04180 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCATP04180 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.18■□□□□ 0.82
LCATP04180 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.18■□□□□ 0.82
LCATP04180 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.18■□□□□ 0.82
LCATP04180 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCATP04180 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCATP04180 AL033527.3-201ENST00000566366 1196 ntBASIC20.18■□□□□ 0.82
LCATP04180 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCATP04180 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.18■□□□□ 0.82
LCATP04180 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCATP04180 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
LCATP04180 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCATP04180 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCATP04180 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LCATP04180 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCATP04180 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCATP04180 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LCATP04180 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LCATP04180 AC022616.5-201ENST00000518796 181 ntBASIC20.17■□□□□ 0.82
LCATP04180 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.17■□□□□ 0.82
LCATP04180 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.17■□□□□ 0.82
LCATP04180 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCATP04180 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LCATP04180 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCATP04180 AC010980.1-201ENST00000587192 1142 ntBASIC20.16■□□□□ 0.82
LCATP04180 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCATP04180 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.16■□□□□ 0.82
LCATP04180 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCATP04180 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.15■□□□□ 0.82
LCATP04180 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCATP04180 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.15■□□□□ 0.82
LCATP04180 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCATP04180 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCATP04180 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.15■□□□□ 0.82
LCATP04180 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCATP04180 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
LCATP04180 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCATP04180 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCATP04180 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCATP04180 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCATP04180 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LCATP04180 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LCATP04180 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCATP04180 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LCATP04180 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCATP04180 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCATP04180 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.14■□□□□ 0.81
LCATP04180 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCATP04180 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LCATP04180 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.14■□□□□ 0.81
LCATP04180 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LCATP04180 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.13■□□□□ 0.81
LCATP04180 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.13■□□□□ 0.81
LCATP04180 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCATP04180 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.13■□□□□ 0.81
LCATP04180 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.13■□□□□ 0.81
LCATP04180 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LCATP04180 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCATP04180 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCATP04180 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.12■□□□□ 0.81
LCATP04180 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
LCATP04180 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.12■□□□□ 0.81
LCATP04180 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCATP04180 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.12■□□□□ 0.81
LCATP04180 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LCATP04180 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.12■□□□□ 0.81
LCATP04180 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.12■□□□□ 0.81
LCATP04180 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms