Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND1P03886 CLDN5-201ENST00000403084 2357 ntBASIC21.82■■□□□ 1.08
MT-ND1P03886 HLA-L-211ENST00000482052 1765 ntBASIC21.82■■□□□ 1.08
MT-ND1P03886 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND1P03886 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND1P03886 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
MT-ND1P03886 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
MT-ND1P03886 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND1P03886 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND1P03886 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND1P03886 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.81■■□□□ 1.08
MT-ND1P03886 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND1P03886 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MT-ND1P03886 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND1P03886 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.81■■□□□ 1.08
MT-ND1P03886 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND1P03886 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND1P03886 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND1P03886 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
MT-ND1P03886 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
MT-ND1P03886 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND1P03886 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.8■■□□□ 1.08
MT-ND1P03886 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND1P03886 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND1P03886 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.8■■□□□ 1.08
MT-ND1P03886 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.8■■□□□ 1.08
MT-ND1P03886 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.8■■□□□ 1.08
MT-ND1P03886 AC025884.2-201ENST00000553429 711 ntBASIC21.8■■□□□ 1.08
MT-ND1P03886 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.8■■□□□ 1.08
MT-ND1P03886 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND1P03886 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.8■■□□□ 1.08
MT-ND1P03886 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
MT-ND1P03886 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND1P03886 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND1P03886 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND1P03886 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND1P03886 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND1P03886 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND1P03886 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.79■■□□□ 1.08
MT-ND1P03886 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND1P03886 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND1P03886 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.79■■□□□ 1.08
MT-ND1P03886 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND1P03886 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MT-ND1P03886 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.79■■□□□ 1.08
MT-ND1P03886 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND1P03886 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND1P03886 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND1P03886 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
MT-ND1P03886 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND1P03886 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND1P03886 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-ND1P03886 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.77■■□□□ 1.08
MT-ND1P03886 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND1P03886 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND1P03886 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
MT-ND1P03886 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND1P03886 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
MT-ND1P03886 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND1P03886 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.77■■□□□ 1.08
MT-ND1P03886 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND1P03886 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND1P03886 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND1P03886 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MT-ND1P03886 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
MT-ND1P03886 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
MT-ND1P03886 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
MT-ND1P03886 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
MT-ND1P03886 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.77■■□□□ 1.07
MT-ND1P03886 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.77■■□□□ 1.07
MT-ND1P03886 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND1P03886 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND1P03886 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND1P03886 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND1P03886 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND1P03886 MIR3960-201ENST00000583311 91 ntBASIC21.76■■□□□ 1.07
MT-ND1P03886 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MT-ND1P03886 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND1P03886 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND1P03886 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-ND1P03886 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND1P03886 AC092296.2-201ENST00000589470 999 ntBASIC21.75■■□□□ 1.07
MT-ND1P03886 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND1P03886 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND1P03886 SMPD5-203ENST00000639008 1464 ntBASIC21.75■■□□□ 1.07
MT-ND1P03886 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND1P03886 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.75■■□□□ 1.07
MT-ND1P03886 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-ND1P03886 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
MT-ND1P03886 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ND1P03886 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.74■■□□□ 1.07
MT-ND1P03886 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ND1P03886 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-ND1P03886 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.74■■□□□ 1.07
MT-ND1P03886 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MT-ND1P03886 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND1P03886 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-ND1P03886 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.73■■□□□ 1.07
MT-ND1P03886 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-ND1P03886 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms