Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CD4P01730 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.88■■□□□ 1.73
CD4P01730 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CD4P01730 SRD5A1P1-201ENST00000442297 786 ntBASIC25.88■■□□□ 1.73
CD4P01730 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CD4P01730 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CD4P01730 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.88■■□□□ 1.73
CD4P01730 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
CD4P01730 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.87■■□□□ 1.73
CD4P01730 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CD4P01730 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CD4P01730 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.87■■□□□ 1.73
CD4P01730 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CD4P01730 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
CD4P01730 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CD4P01730 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.86■■□□□ 1.73
CD4P01730 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CD4P01730 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.86■■□□□ 1.73
CD4P01730 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CD4P01730 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CD4P01730 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CD4P01730 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CD4P01730 MIR5787-201ENST00000611784 55 ntBASIC25.85■■□□□ 1.73
CD4P01730 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CD4P01730 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.85■■□□□ 1.73
CD4P01730 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CD4P01730 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CD4P01730 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.84■■□□□ 1.73
CD4P01730 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.84■■□□□ 1.73
CD4P01730 AC104564.3-201ENST00000582367 638 ntBASIC25.84■■□□□ 1.73
CD4P01730 AL136967.2-201ENST00000623968 743 ntBASIC25.84■■□□□ 1.73
CD4P01730 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.84■■□□□ 1.73
CD4P01730 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
CD4P01730 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
CD4P01730 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.83■■□□□ 1.73
CD4P01730 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.83■■□□□ 1.73
CD4P01730 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
CD4P01730 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CD4P01730 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CD4P01730 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CD4P01730 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.83■■□□□ 1.73
CD4P01730 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
CD4P01730 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CD4P01730 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.82■■□□□ 1.72
CD4P01730 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CD4P01730 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CD4P01730 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.82■■□□□ 1.72
CD4P01730 AC105265.2-201ENST00000467189 838 ntBASIC25.82■■□□□ 1.72
CD4P01730 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CD4P01730 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CD4P01730 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CD4P01730 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CD4P01730 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CD4P01730 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CD4P01730 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CD4P01730 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CD4P01730 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
CD4P01730 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.81■■□□□ 1.72
CD4P01730 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CD4P01730 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.81■■□□□ 1.72
CD4P01730 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.81■■□□□ 1.72
CD4P01730 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
CD4P01730 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CD4P01730 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.8■■□□□ 1.72
CD4P01730 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CD4P01730 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CD4P01730 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.8■■□□□ 1.72
CD4P01730 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CD4P01730 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CD4P01730 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CD4P01730 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CD4P01730 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.8■■□□□ 1.72
CD4P01730 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CD4P01730 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CD4P01730 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CD4P01730 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.78■■□□□ 1.72
CD4P01730 AF213884.3-201ENST00000563833 479 ntBASIC25.78■■□□□ 1.72
CD4P01730 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.78■■□□□ 1.72
CD4P01730 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
CD4P01730 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
CD4P01730 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CD4P01730 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CD4P01730 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CD4P01730 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.77■■□□□ 1.72
CD4P01730 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CD4P01730 MIR939-201ENST00000401314 82 ntBASIC25.77■■□□□ 1.72
CD4P01730 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.77■■□□□ 1.72
CD4P01730 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.77■■□□□ 1.72
CD4P01730 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CD4P01730 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CD4P01730 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.77■■□□□ 1.72
CD4P01730 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CD4P01730 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CD4P01730 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.75■■□□□ 1.71
CD4P01730 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CD4P01730 AC004448.1-201ENST00000458332 883 ntBASIC25.75■■□□□ 1.71
CD4P01730 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.75■■□□□ 1.71
CD4P01730 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CD4P01730 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CD4P01730 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms