Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
TSPAN3O60637 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN3O60637 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN3O60637 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN3O60637 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN3O60637 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN3O60637 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN3O60637 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.98■■□□□ 1.43
TSPAN3O60637 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN3O60637 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.98■■□□□ 1.43
TSPAN3O60637 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN3O60637 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.98■■□□□ 1.43
TSPAN3O60637 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TSPAN3O60637 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TSPAN3O60637 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.97■■□□□ 1.43
TSPAN3O60637 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TSPAN3O60637 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TSPAN3O60637 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.97■■□□□ 1.43
TSPAN3O60637 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.97■■□□□ 1.43
TSPAN3O60637 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.97■■□□□ 1.43
TSPAN3O60637 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.97■■□□□ 1.43
TSPAN3O60637 MTDHP2-201ENST00000601468 714 ntBASIC23.97■■□□□ 1.43
TSPAN3O60637 AC010997.5-201ENST00000609182 354 ntBASIC23.97■■□□□ 1.43
TSPAN3O60637 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.97■■□□□ 1.43
TSPAN3O60637 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TSPAN3O60637 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
TSPAN3O60637 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.96■■□□□ 1.43
TSPAN3O60637 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.96■■□□□ 1.43
TSPAN3O60637 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TSPAN3O60637 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.96■■□□□ 1.43
TSPAN3O60637 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TSPAN3O60637 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TSPAN3O60637 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TSPAN3O60637 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TSPAN3O60637 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TSPAN3O60637 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
TSPAN3O60637 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TSPAN3O60637 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TSPAN3O60637 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.94■■□□□ 1.42
TSPAN3O60637 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.94■■□□□ 1.42
TSPAN3O60637 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.94■■□□□ 1.42
TSPAN3O60637 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.94■■□□□ 1.42
TSPAN3O60637 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.94■■□□□ 1.42
TSPAN3O60637 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.94■■□□□ 1.42
TSPAN3O60637 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
TSPAN3O60637 MIR6089-201ENST00000616698 64 ntBASIC23.94■■□□□ 1.42
TSPAN3O60637 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.94■■□□□ 1.42
TSPAN3O60637 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TSPAN3O60637 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TSPAN3O60637 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TSPAN3O60637 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TSPAN3O60637 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN3O60637 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN3O60637 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
TSPAN3O60637 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN3O60637 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
TSPAN3O60637 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN3O60637 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN3O60637 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TSPAN3O60637 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TSPAN3O60637 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
TSPAN3O60637 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TSPAN3O60637 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.92■■□□□ 1.42
TSPAN3O60637 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TSPAN3O60637 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TSPAN3O60637 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.91■■□□□ 1.42
TSPAN3O60637 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TSPAN3O60637 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TSPAN3O60637 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.9■■□□□ 1.42
TSPAN3O60637 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.9■■□□□ 1.42
TSPAN3O60637 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TSPAN3O60637 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.9■■□□□ 1.42
TSPAN3O60637 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TSPAN3O60637 SNX5-217ENST00000606557 1087 ntBASIC23.9■■□□□ 1.42
TSPAN3O60637 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.9■■□□□ 1.42
TSPAN3O60637 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.9■■□□□ 1.42
TSPAN3O60637 AC022211.4-201ENST00000625094 2161 ntBASIC23.89■■□□□ 1.42
TSPAN3O60637 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
TSPAN3O60637 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TSPAN3O60637 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.89■■□□□ 1.41
TSPAN3O60637 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.89■■□□□ 1.41
TSPAN3O60637 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TSPAN3O60637 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.89■■□□□ 1.41
TSPAN3O60637 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TSPAN3O60637 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TSPAN3O60637 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TSPAN3O60637 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TSPAN3O60637 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.88■■□□□ 1.41
TSPAN3O60637 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
TSPAN3O60637 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TSPAN3O60637 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
TSPAN3O60637 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
TSPAN3O60637 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.87■■□□□ 1.41
TSPAN3O60637 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.87■■□□□ 1.41
TSPAN3O60637 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TSPAN3O60637 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.87■■□□□ 1.41
TSPAN3O60637 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TSPAN3O60637 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TSPAN3O60637 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TSPAN3O60637 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms