Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX5O60225 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX5O60225 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX5O60225 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX5O60225 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX5O60225 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SSX5O60225 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX5O60225 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SSX5O60225 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX5O60225 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX5O60225 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX5O60225 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX5O60225 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX5O60225 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX5O60225 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.74■□□□□ 0.75
SSX5O60225 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SSX5O60225 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SSX5O60225 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.74■□□□□ 0.75
SSX5O60225 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX5O60225 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX5O60225 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.74■□□□□ 0.75
SSX5O60225 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX5O60225 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SSX5O60225 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX5O60225 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.73■□□□□ 0.75
SSX5O60225 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX5O60225 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX5O60225 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SSX5O60225 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSX5O60225 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SSX5O60225 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.73■□□□□ 0.75
SSX5O60225 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX5O60225 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX5O60225 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.73■□□□□ 0.75
SSX5O60225 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.73■□□□□ 0.75
SSX5O60225 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.73■□□□□ 0.75
SSX5O60225 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.72■□□□□ 0.75
SSX5O60225 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.72■□□□□ 0.75
SSX5O60225 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.72■□□□□ 0.75
SSX5O60225 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SSX5O60225 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.72■□□□□ 0.75
SSX5O60225 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSX5O60225 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX5O60225 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX5O60225 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.71■□□□□ 0.75
SSX5O60225 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX5O60225 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX5O60225 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX5O60225 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX5O60225 MIR3960-201ENST00000583311 91 ntBASIC19.71■□□□□ 0.75
SSX5O60225 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX5O60225 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX5O60225 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSX5O60225 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX5O60225 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX5O60225 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX5O60225 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SSX5O60225 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSX5O60225 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX5O60225 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.7■□□□□ 0.74
SSX5O60225 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.7■□□□□ 0.74
SSX5O60225 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.7■□□□□ 0.74
SSX5O60225 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX5O60225 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX5O60225 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX5O60225 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SSX5O60225 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX5O60225 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.7■□□□□ 0.74
SSX5O60225 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX5O60225 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SSX5O60225 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX5O60225 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.69■□□□□ 0.74
SSX5O60225 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.69■□□□□ 0.74
SSX5O60225 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSX5O60225 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SSX5O60225 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SSX5O60225 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX5O60225 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SSX5O60225 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX5O60225 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX5O60225 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX5O60225 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX5O60225 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.68■□□□□ 0.74
SSX5O60225 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.68■□□□□ 0.74
SSX5O60225 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SSX5O60225 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SSX5O60225 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX5O60225 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX5O60225 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms