Protein–RNA interactions for Protein: O15370

SOX12, Transcription factor SOX-12, humanhuman

Predictions only

Length 315 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12O15370 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
SOX12O15370 AC133561.4-201ENST00000566112 224 ntBASIC31.57■■■□□ 2.64
SOX12O15370 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
SOX12O15370 AC010501.1-201ENST00000606270 1962 ntBASIC31.56■■■□□ 2.64
SOX12O15370 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.56■■■□□ 2.64
SOX12O15370 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SOX12O15370 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SOX12O15370 AC142381.2-201ENST00000566120 298 ntBASIC31.56■■■□□ 2.64
SOX12O15370 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
SOX12O15370 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.56■■■□□ 2.64
SOX12O15370 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SOX12O15370 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.55■■■□□ 2.64
SOX12O15370 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.55■■■□□ 2.64
SOX12O15370 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
SOX12O15370 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.55■■■□□ 2.64
SOX12O15370 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SOX12O15370 AL136162.1-201ENST00000607711 1078 ntBASIC31.55■■■□□ 2.64
SOX12O15370 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
SOX12O15370 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SOX12O15370 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
SOX12O15370 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
SOX12O15370 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.53■■■□□ 2.64
SOX12O15370 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SOX12O15370 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SOX12O15370 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.53■■■□□ 2.64
SOX12O15370 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
SOX12O15370 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.52■■■□□ 2.64
SOX12O15370 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
SOX12O15370 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SOX12O15370 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.52■■■□□ 2.64
SOX12O15370 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.51■■■□□ 2.64
SOX12O15370 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.51■■■□□ 2.63
SOX12O15370 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.51■■■□□ 2.63
SOX12O15370 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SOX12O15370 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.51■■■□□ 2.63
SOX12O15370 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SOX12O15370 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
SOX12O15370 SRD5A1P1-201ENST00000442297 786 ntBASIC31.49■■■□□ 2.63
SOX12O15370 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.49■■■□□ 2.63
SOX12O15370 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.49■■■□□ 2.63
SOX12O15370 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
SOX12O15370 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.49■■■□□ 2.63
SOX12O15370 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
SOX12O15370 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.49■■■□□ 2.63
SOX12O15370 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
SOX12O15370 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
SOX12O15370 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
SOX12O15370 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SOX12O15370 AL031432.3-201ENST00000607698 485 ntBASIC31.48■■■□□ 2.63
SOX12O15370 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SOX12O15370 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
SOX12O15370 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SOX12O15370 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.47■■■□□ 2.63
SOX12O15370 AC024257.2-201ENST00000549699 147 ntBASIC31.47■■■□□ 2.63
SOX12O15370 AC135279.3-201ENST00000610945 1311 ntBASIC31.47■■■□□ 2.63
SOX12O15370 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.46■■■□□ 2.63
SOX12O15370 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.46■■■□□ 2.63
SOX12O15370 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
SOX12O15370 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SOX12O15370 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.46■■■□□ 2.63
SOX12O15370 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SOX12O15370 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SOX12O15370 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SOX12O15370 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
SOX12O15370 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SOX12O15370 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.45■■■□□ 2.63
SOX12O15370 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SOX12O15370 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.45■■■□□ 2.63
SOX12O15370 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
SOX12O15370 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
SOX12O15370 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SOX12O15370 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.44■■■□□ 2.62
SOX12O15370 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SOX12O15370 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SOX12O15370 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SOX12O15370 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
SOX12O15370 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SOX12O15370 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.44■■■□□ 2.62
SOX12O15370 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SOX12O15370 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.43■■■□□ 2.62
SOX12O15370 AC004448.1-201ENST00000458332 883 ntBASIC31.43■■■□□ 2.62
SOX12O15370 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.43■■■□□ 2.62
SOX12O15370 AC092803.2-201ENST00000564287 1899 ntBASIC31.43■■■□□ 2.62
SOX12O15370 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SOX12O15370 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SOX12O15370 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SOX12O15370 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SOX12O15370 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SOX12O15370 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SOX12O15370 SUDS3P1-201ENST00000505831 966 ntBASIC31.42■■■□□ 2.62
SOX12O15370 RARRES2P6-201ENST00000567333 442 ntBASIC31.42■■■□□ 2.62
SOX12O15370 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SOX12O15370 AL121749.1-202ENST00000609313 2153 ntBASIC31.41■■■□□ 2.62
SOX12O15370 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SOX12O15370 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.41■■■□□ 2.62
SOX12O15370 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SOX12O15370 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
SOX12O15370 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.41■■■□□ 2.62
SOX12O15370 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
SOX12O15370 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms