Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC010980.1-201ENST00000587192 1142 ntBASIC24.42■■□□□ 1.5
TCRBV5S1A1TA0A578 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TCRBV5S1A1TA0A578 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.42■■□□□ 1.5
TCRBV5S1A1TA0A578 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TCRBV5S1A1TA0A578 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
TCRBV5S1A1TA0A578 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TCRBV5S1A1TA0A578 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.41■■□□□ 1.5
TCRBV5S1A1TA0A578 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.41■■□□□ 1.5
TCRBV5S1A1TA0A578 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.41■■□□□ 1.5
TCRBV5S1A1TA0A578 AC011551.1-201ENST00000614101 683 ntBASIC24.41■■□□□ 1.5
TCRBV5S1A1TA0A578 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TCRBV5S1A1TA0A578 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TCRBV5S1A1TA0A578 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.41■■□□□ 1.5
TCRBV5S1A1TA0A578 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.4■■□□□ 1.5
TCRBV5S1A1TA0A578 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
TCRBV5S1A1TA0A578 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TCRBV5S1A1TA0A578 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TCRBV5S1A1TA0A578 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TCRBV5S1A1TA0A578 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.39■■□□□ 1.5
TCRBV5S1A1TA0A578 BHLHE23-202ENST00000612929 1109 ntBASIC24.39■■□□□ 1.49
TCRBV5S1A1TA0A578 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TCRBV5S1A1TA0A578 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TCRBV5S1A1TA0A578 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TCRBV5S1A1TA0A578 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.38■■□□□ 1.49
TCRBV5S1A1TA0A578 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TCRBV5S1A1TA0A578 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TCRBV5S1A1TA0A578 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
TCRBV5S1A1TA0A578 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.38■■□□□ 1.49
TCRBV5S1A1TA0A578 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TCRBV5S1A1TA0A578 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TCRBV5S1A1TA0A578 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TCRBV5S1A1TA0A578 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.37■■□□□ 1.49
TCRBV5S1A1TA0A578 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TCRBV5S1A1TA0A578 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.36■■□□□ 1.49
TCRBV5S1A1TA0A578 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TCRBV5S1A1TA0A578 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
TCRBV5S1A1TA0A578 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.36■■□□□ 1.49
TCRBV5S1A1TA0A578 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
TCRBV5S1A1TA0A578 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.36■■□□□ 1.49
TCRBV5S1A1TA0A578 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TCRBV5S1A1TA0A578 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 AC103834.1-201ENST00000520383 144 ntBASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
TCRBV5S1A1TA0A578 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
TCRBV5S1A1TA0A578 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.34■■□□□ 1.49
TCRBV5S1A1TA0A578 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
TCRBV5S1A1TA0A578 AC120024.1-201ENST00000562672 995 ntBASIC24.34■■□□□ 1.49
TCRBV5S1A1TA0A578 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.34■■□□□ 1.49
TCRBV5S1A1TA0A578 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
TCRBV5S1A1TA0A578 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TCRBV5S1A1TA0A578 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TCRBV5S1A1TA0A578 MIR4508-201ENST00000584178 70 ntBASIC24.33■■□□□ 1.49
TCRBV5S1A1TA0A578 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.33■■□□□ 1.48
TCRBV5S1A1TA0A578 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
TCRBV5S1A1TA0A578 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TCRBV5S1A1TA0A578 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.32■■□□□ 1.48
TCRBV5S1A1TA0A578 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TCRBV5S1A1TA0A578 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TCRBV5S1A1TA0A578 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.32■■□□□ 1.48
TCRBV5S1A1TA0A578 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
TCRBV5S1A1TA0A578 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.32■■□□□ 1.48
TCRBV5S1A1TA0A578 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.32■■□□□ 1.48
TCRBV5S1A1TA0A578 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TCRBV5S1A1TA0A578 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TCRBV5S1A1TA0A578 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TCRBV5S1A1TA0A578 KRT18P24-201ENST00000344739 1156 ntBASIC24.31■■□□□ 1.48
TCRBV5S1A1TA0A578 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TCRBV5S1A1TA0A578 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.31■■□□□ 1.48
TCRBV5S1A1TA0A578 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.31■■□□□ 1.48
TCRBV5S1A1TA0A578 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TCRBV5S1A1TA0A578 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.31■■□□□ 1.48
TCRBV5S1A1TA0A578 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TCRBV5S1A1TA0A578 ABCB10P4-201ENST00000566803 2184 ntBASIC24.3■■□□□ 1.48
TCRBV5S1A1TA0A578 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.3■■□□□ 1.48
TCRBV5S1A1TA0A578 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TCRBV5S1A1TA0A578 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TCRBV5S1A1TA0A578 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TCRBV5S1A1TA0A578 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
TCRBV5S1A1TA0A578 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TCRBV5S1A1TA0A578 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms