Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM238LA0A1B0GVL6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM238LA0A1B0GVL6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM238LA0A1B0GVL6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM238LA0A1B0GVL6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM238LA0A1B0GVL6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM238LA0A1B0GVL6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM238LA0A1B0GVL6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM238LA0A1B0GVL6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM238LA0A1B0GVL6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM238LA0A1B0GVL6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM238LA0A1B0GVL6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM238LA0A1B0GVL6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM238LA0A1B0GVL6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM238LA0A1B0GVL6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM238LA0A1B0GVL6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TMEM238LA0A1B0GVL6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM238LA0A1B0GVL6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM238LA0A1B0GVL6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms