Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 ECEL1P1-201ENST00000373592 1742 ntBASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 C1orf229-201ENST00000623686 2258 ntBASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-1A0A0B4J245 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 GUSBP5-202ENST00000510805 1989 ntBASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV12-1A0A0B4J245 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV12-1A0A0B4J245 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV12-1A0A0B4J245 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRAV12-1A0A0B4J245 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.27■□□□□ 0.19
TRAV12-1A0A0B4J245 PKD1P6-201ENST00000343738 4769 ntBASIC16.27■□□□□ 0.19
TRAV12-1A0A0B4J245 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV12-1A0A0B4J245 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-1A0A0B4J245 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV12-1A0A0B4J245 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV12-1A0A0B4J245 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-1A0A0B4J245 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV12-1A0A0B4J245 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV12-1A0A0B4J245 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 AL359504.2-201ENST00000605506 1601 ntBASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms