Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRGV5A0A0B4J1U4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRGV5A0A0B4J1U4 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.94■□□□□ 0.94
TRGV5A0A0B4J1U4 MIR6722-201ENST00000617286 78 ntBASIC20.94■□□□□ 0.94
TRGV5A0A0B4J1U4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.94■□□□□ 0.94
TRGV5A0A0B4J1U4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRGV5A0A0B4J1U4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRGV5A0A0B4J1U4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.94■□□□□ 0.94
TRGV5A0A0B4J1U4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRGV5A0A0B4J1U4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRGV5A0A0B4J1U4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.93■□□□□ 0.94
TRGV5A0A0B4J1U4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.93■□□□□ 0.94
TRGV5A0A0B4J1U4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
TRGV5A0A0B4J1U4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRGV5A0A0B4J1U4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.93■□□□□ 0.94
TRGV5A0A0B4J1U4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 AC131281.2-201ENST00000520478 145 ntBASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRGV5A0A0B4J1U4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
TRGV5A0A0B4J1U4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRGV5A0A0B4J1U4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRGV5A0A0B4J1U4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.91■□□□□ 0.94
TRGV5A0A0B4J1U4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRGV5A0A0B4J1U4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.91■□□□□ 0.94
TRGV5A0A0B4J1U4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.9■□□□□ 0.94
TRGV5A0A0B4J1U4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
TRGV5A0A0B4J1U4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV5A0A0B4J1U4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV5A0A0B4J1U4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TRGV5A0A0B4J1U4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.9■□□□□ 0.94
TRGV5A0A0B4J1U4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.9■□□□□ 0.94
TRGV5A0A0B4J1U4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV5A0A0B4J1U4 MIR6089-201ENST00000616698 64 ntBASIC20.9■□□□□ 0.94
TRGV5A0A0B4J1U4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRGV5A0A0B4J1U4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.89■□□□□ 0.94
TRGV5A0A0B4J1U4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.89■□□□□ 0.94
TRGV5A0A0B4J1U4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRGV5A0A0B4J1U4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.89■□□□□ 0.93
TRGV5A0A0B4J1U4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.89■□□□□ 0.93
TRGV5A0A0B4J1U4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.89■□□□□ 0.93
TRGV5A0A0B4J1U4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.89■□□□□ 0.93
TRGV5A0A0B4J1U4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRGV5A0A0B4J1U4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.89■□□□□ 0.93
TRGV5A0A0B4J1U4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRGV5A0A0B4J1U4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.88■□□□□ 0.93
TRGV5A0A0B4J1U4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRGV5A0A0B4J1U4 AC004448.1-201ENST00000458332 883 ntBASIC20.88■□□□□ 0.93
TRGV5A0A0B4J1U4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.88■□□□□ 0.93
TRGV5A0A0B4J1U4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRGV5A0A0B4J1U4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV5A0A0B4J1U4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRGV5A0A0B4J1U4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TRGV5A0A0B4J1U4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.87■□□□□ 0.93
TRGV5A0A0B4J1U4 AL136116.3-201ENST00000402907 1138 ntBASIC20.87■□□□□ 0.93
TRGV5A0A0B4J1U4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.87■□□□□ 0.93
TRGV5A0A0B4J1U4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRGV5A0A0B4J1U4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.87■□□□□ 0.93
TRGV5A0A0B4J1U4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRGV5A0A0B4J1U4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRGV5A0A0B4J1U4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.85■□□□□ 0.93
TRGV5A0A0B4J1U4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV5A0A0B4J1U4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV5A0A0B4J1U4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.85■□□□□ 0.93
TRGV5A0A0B4J1U4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.85■□□□□ 0.93
TRGV5A0A0B4J1U4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.85■□□□□ 0.93
TRGV5A0A0B4J1U4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV5A0A0B4J1U4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRGV5A0A0B4J1U4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRGV5A0A0B4J1U4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms