Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV16A0A0A6YYK6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV16A0A0A6YYK6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 AC141586.4-201ENST00000624558 1573 ntBASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV16A0A0A6YYK6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV16A0A0A6YYK6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV16A0A0A6YYK6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV16A0A0A6YYK6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV16A0A0A6YYK6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV16A0A0A6YYK6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAV16A0A0A6YYK6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV16A0A0A6YYK6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV16A0A0A6YYK6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV16A0A0A6YYK6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV16A0A0A6YYK6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV16A0A0A6YYK6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV16A0A0A6YYK6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV16A0A0A6YYK6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV16A0A0A6YYK6 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV16A0A0A6YYK6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV16A0A0A6YYK6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV16A0A0A6YYK6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAV16A0A0A6YYK6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV16A0A0A6YYK6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV16A0A0A6YYK6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 AC060814.1-201ENST00000554326 538 ntBASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRAV16A0A0A6YYK6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV16A0A0A6YYK6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV16A0A0A6YYK6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV16A0A0A6YYK6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV16A0A0A6YYK6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV16A0A0A6YYK6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV16A0A0A6YYK6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRAV16A0A0A6YYK6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 GPX1-201ENST00000419349 1106 ntBASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms