Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC187A0A096LP49 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC187A0A096LP49 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC187A0A096LP49 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC187A0A096LP49 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC187A0A096LP49 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC187A0A096LP49 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.15■■□□□ 1.14
CCDC187A0A096LP49 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.15■■□□□ 1.14
CCDC187A0A096LP49 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC187A0A096LP49 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC187A0A096LP49 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC187A0A096LP49 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC187A0A096LP49 AC096887.2-201ENST00000623443 1957 ntBASIC22.14■■□□□ 1.14
CCDC187A0A096LP49 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC187A0A096LP49 AC005703.6-201ENST00000623265 1329 ntBASIC22.14■■□□□ 1.14
CCDC187A0A096LP49 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC187A0A096LP49 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC187A0A096LP49 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC187A0A096LP49 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.14■■□□□ 1.13
CCDC187A0A096LP49 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
CCDC187A0A096LP49 DUX4L19-201ENST00000557448 1267 ntBASIC22.14■■□□□ 1.13
CCDC187A0A096LP49 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CCDC187A0A096LP49 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC187A0A096LP49 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC187A0A096LP49 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC187A0A096LP49 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CCDC187A0A096LP49 AC026271.2-201ENST00000428091 497 ntBASIC22.13■■□□□ 1.13
CCDC187A0A096LP49 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.13■■□□□ 1.13
CCDC187A0A096LP49 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.13■■□□□ 1.13
CCDC187A0A096LP49 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CCDC187A0A096LP49 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CCDC187A0A096LP49 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC187A0A096LP49 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC187A0A096LP49 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 AC092666.2-201ENST00000613287 246 ntBASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCDC187A0A096LP49 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.11■■□□□ 1.13
CCDC187A0A096LP49 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC187A0A096LP49 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CCDC187A0A096LP49 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC187A0A096LP49 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.11■■□□□ 1.13
CCDC187A0A096LP49 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
CCDC187A0A096LP49 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC187A0A096LP49 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.1■■□□□ 1.13
CCDC187A0A096LP49 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
CCDC187A0A096LP49 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC187A0A096LP49 AC105265.2-201ENST00000467189 838 ntBASIC22.1■■□□□ 1.13
CCDC187A0A096LP49 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC187A0A096LP49 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.1■■□□□ 1.13
CCDC187A0A096LP49 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.1■■□□□ 1.13
CCDC187A0A096LP49 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC187A0A096LP49 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC187A0A096LP49 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 AC092171.4-201ENST00000609130 632 ntBASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 MIR5787-201ENST00000611784 55 ntBASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 ERN1-208ENST00000606895 2068 ntBASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC187A0A096LP49 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.08■■□□□ 1.13
CCDC187A0A096LP49 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.08■■□□□ 1.13
CCDC187A0A096LP49 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.08■■□□□ 1.13
CCDC187A0A096LP49 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC187A0A096LP49 AF213884.3-201ENST00000563833 479 ntBASIC22.08■■□□□ 1.13
CCDC187A0A096LP49 AL136967.2-201ENST00000623968 743 ntBASIC22.08■■□□□ 1.13
CCDC187A0A096LP49 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC187A0A096LP49 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC187A0A096LP49 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
CCDC187A0A096LP49 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC187A0A096LP49 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CCDC187A0A096LP49 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC187A0A096LP49 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.07■■□□□ 1.12
CCDC187A0A096LP49 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.07■■□□□ 1.12
CCDC187A0A096LP49 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.07■■□□□ 1.12
CCDC187A0A096LP49 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC187A0A096LP49 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CCDC187A0A096LP49 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC187A0A096LP49 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC187A0A096LP49 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.07■■□□□ 1.12
CCDC187A0A096LP49 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.06■■□□□ 1.12
CCDC187A0A096LP49 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms