Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV18A0A075B6X5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV18A0A075B6X5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV18A0A075B6X5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV18A0A075B6X5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRAV18A0A075B6X5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV18A0A075B6X5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRAV18A0A075B6X5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAV18A0A075B6X5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV18A0A075B6X5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV18A0A075B6X5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV18A0A075B6X5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAV18A0A075B6X5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV18A0A075B6X5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV18A0A075B6X5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRAV18A0A075B6X5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV18A0A075B6X5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAV18A0A075B6X5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV18A0A075B6X5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRAV18A0A075B6X5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 AL117328.2-201ENST00000624617 1940 ntBASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV18A0A075B6X5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV18A0A075B6X5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRAV18A0A075B6X5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV18A0A075B6X5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV18A0A075B6X5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV18A0A075B6X5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV18A0A075B6X5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAV18A0A075B6X5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV18A0A075B6X5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV18A0A075B6X5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV18A0A075B6X5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV18A0A075B6X5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV18A0A075B6X5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV18A0A075B6X5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV18A0A075B6X5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.83■□□□□ 0.77
TRAV18A0A075B6X5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TRAV18A0A075B6X5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV18A0A075B6X5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV18A0A075B6X5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV18A0A075B6X5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.83■□□□□ 0.76
TRAV18A0A075B6X5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV18A0A075B6X5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV18A0A075B6X5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV18A0A075B6X5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRAV18A0A075B6X5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV18A0A075B6X5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRAV18A0A075B6X5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV18A0A075B6X5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV18A0A075B6X5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms