Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.26□□□□□ -0.45
TSSC4Q9Y5U2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 AL009178.2-201ENST00000597278 2719 ntBASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 TOMM22P5-201ENST00000416399 439 ntBASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 KRT43P-201ENST00000434019 910 ntBASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 FAM86LP-201ENST00000478302 853 ntBASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 KRT8P22-201ENST00000562317 1415 ntBASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TSSC4Q9Y5U2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 AC136604.1-201ENST00000418535 575 ntBASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 AC112492.5-201ENST00000421897 457 ntBASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.24□□□□□ -0.45
TSSC4Q9Y5U2 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms