Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC136604.1-201ENST00000418535 575 ntBASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 PDPK2P-202ENST00000562415 1191 ntBASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 AC027307.2-201ENST00000591252 911 ntBASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 AC026979.3-201ENST00000607315 403 ntBASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 AC064836.3-201ENST00000607928 673 ntBASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 CICP11-201ENST00000434745 2827 ntBASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.87□□□□□ -0.67
UBE2D4Q9Y2X8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 AKAP8P1-201ENST00000434743 1349 ntBASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 AL607033.1-201ENST00000623900 1599 ntBASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 REXO1L2P-201ENST00000425429 2069 ntBASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 AC011467.4-201ENST00000594891 528 ntBASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 AL691432.3-201ENST00000621860 400 ntBASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.86□□□□□ -0.67
UBE2D4Q9Y2X8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms