Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 SAMD11P1-201ENST00000571429 661 ntBASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 AC008761.3-201ENST00000624803 892 ntBASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 REXO1L4P-201ENST00000605109 1937 ntBASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 AP000845.1-201ENST00000581677 2131 ntBASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 AC012508.2-201ENST00000567613 1472 ntBASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 RPL13AP25-201ENST00000484130 612 ntBASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 AC093726.1-201ENST00000608064 963 ntBASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 MIR8072-201ENST00000614241 80 ntBASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGC3Q9UN70 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 AC002472.2-201ENST00000442739 958 ntBASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 AC004066.1-201ENST00000502488 802 ntBASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 AL132655.2-201ENST00000596276 594 ntBASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 AC107373.2-201ENST00000607735 490 ntBASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGC3Q9UN70 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms