Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
DNMT3BQ9UBC3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
DNMT3BQ9UBC3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 NUS1P3-201ENST00000423502 862 ntBASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 RPSAP36-202ENST00000494591 1261 ntBASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AC005695.3-201ENST00000614522 232 ntBASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AL008638.5-201ENST00000623814 1298 ntBASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 PRSS30P-206ENST00000641773 873 ntBASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AC010491.1-201ENST00000563101 2797 ntBASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNMT3BQ9UBC3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 AL136379.1-201ENST00000623471 2642 ntBASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 RN7SL48P-201ENST00000579283 293 ntBASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
DNMT3BQ9UBC3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 AC015818.8-201ENST00000587907 1519 ntBASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 TPM3P8-201ENST00000330554 643 ntBASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNMT3BQ9UBC3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms