Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SLC52A1Q9NWF4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC52A1Q9NWF4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC52A1Q9NWF4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC21.83■■□□□ 1.08
SLC52A1Q9NWF4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC52A1Q9NWF4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 AC026316.1-201ENST00000398900 414 ntBASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 AC019193.1-201ENST00000506678 823 ntBASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 MIR3147-201ENST00000577811 66 ntBASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 RN7SL555P-201ENST00000584742 339 ntBASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 AC008825.2-201ENST00000603374 718 ntBASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC52A1Q9NWF4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 E2F3P2-201ENST00000447755 1422 ntBASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 AC009093.2-202ENST00000620513 2079 ntBASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 HCG11-201ENST00000411553 5696 ntBASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 AC104784.1-201ENST00000473096 294 ntBASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 AC116345.2-201ENST00000512837 523 ntBASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 IQSEC3P1-201ENST00000538799 536 ntBASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 INE2-201ENST00000630399 1874 ntBASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC52A1Q9NWF4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 MIR4754-201ENST00000582477 89 ntBASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 AP003419.4-201ENST00000616071 517 ntBASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 AL603832.2-201ENST00000566195 2125 ntBASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SLC52A1Q9NWF4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms