Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AC137630.3-201ENST00000607245 391 ntBASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AC010503.4-201ENST00000615487 688 ntBASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AL024508.2-201ENST00000607749 1894 ntBASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AC106820.4-201ENST00000561847 5616 ntBASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 PKP4P1-201ENST00000426801 2158 ntBASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 MCU-204ENST00000536019 3224 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AL118505.1-201ENST00000619370 1932 ntBASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 CD72-202ENST00000378430 585 ntTSL 3 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 MIR564-202ENST00000385049 94 ntBASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42SE1Q9NRR8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms