Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 AL691432.1-201ENST00000596308 1422 ntBASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.64□□□□□ -0.23
PCDHB16Q9NRJ7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 MED15P5-201ENST00000423150 992 ntBASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 KRT18P58-201ENST00000527480 1120 ntBASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 AC026979.3-201ENST00000607315 403 ntBASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.63□□□□□ -0.23
PCDHB16Q9NRJ7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 AL022342.1-201ENST00000400363 863 ntBASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 AP002472.1-201ENST00000577490 586 ntBASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 AC008267.7-201ENST00000624570 1194 ntBASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms